Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AL513043.1-201ENST00000439124 535 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 RN7SKP210-201ENST00000459176 261 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 RNU6-1037P-201ENST00000459571 107 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC008481.1-201ENST00000463278 396 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 RN7SL70P-201ENST00000478322 302 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 RN7SL267P-201ENST00000485107 261 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AP001025.1-201ENST00000486139 332 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 RNU6-1234P-201ENST00000516877 103 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 IGKV1D-22-201ENST00000518953 324 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AP005639.1-201ENST00000526939 192 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 HMGN1P26-201ENST00000558737 303 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC233702.7-202ENST00000582941 211 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC114477.1-201ENST00000605097 605 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AL049539.1-201ENST00000611964 459 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 MRPL57P1-201ENST00000621486 265 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 OFD1P17-201ENST00000437639 3018 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 RNU1-5P-201ENST00000362684 144 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 RNU6-312P-201ENST00000364629 107 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 Y_RNA.262-201ENST00000364641 102 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 Y_RNA.286-201ENST00000364813 102 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 TMSB10P2-201ENST00000416049 131 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 RPL23AP33-201ENST00000442301 452 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AL117692.1-201ENST00000494283 713 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AC022206.1-201ENST00000495947 347 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AC005840.1-201ENST00000498412 377 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 RNA5SP116-201ENST00000516132 98 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 SNORD96A-201ENST00000606577 79 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 MIR6085-201ENST00000618314 110 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 U1.34-201ENST00000618578 162 ntBASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS9D1Q9Y2B5 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 RAD17P1-201ENST00000418130 2042 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 SNORD8-201ENST00000363915 110 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 RNU4-84P-201ENST00000364200 139 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 MIR539-201ENST00000365690 78 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 HSPE1P8-201ENST00000406997 288 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 AL353133.1-201ENST00000407695 401 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 RN7SKP205-201ENST00000410999 307 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 AC069213.2-201ENST00000420238 366 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 OOSP1P1-201ENST00000423265 274 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 AC010631.1-201ENST00000474150 156 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 RPS4XP22-201ENST00000480755 780 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 AC073916.1-201ENST00000545095 130 ntBASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS9D1Q9Y2B5 RNU6-84P-201ENST00000607737 102 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms