Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 snoU13.4-201ENST00000458916 104 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 GAPDHP39-201ENST00000481866 979 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 RNA5SP76-201ENST00000516277 87 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 IGKV2D-36-201ENST00000518643 226 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC022690.1-201ENST00000526681 550 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 SETP2-201ENST00000553886 926 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AP001029.3-201ENST00000588063 596 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 MIMT1-201ENST00000597105 1050 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC103881.1-201ENST00000603476 538 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC093732.2-201ENST00000607950 274 ntBASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS29Q9UBQ0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 SNORA14A-201ENST00000364773 135 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 CD24P4-201ENST00000382840 243 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AL645937.1-202ENST00000421799 937 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 FO393419.3-201ENST00000428741 282 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AL513175.1-201ENST00000431492 780 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 SNRPEP4-201ENST00000435815 279 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 HIGD1AP13-201ENST00000509878 289 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AC105914.1-201ENST00000511798 226 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 GMPSP1-201ENST00000514075 579 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 SNORA31.1-201ENST00000515993 133 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 SNORA31.5-201ENST00000516190 133 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 COX6CP3-201ENST00000580869 223 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AL627309.6-201ENST00000606857 840 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AC002076.2-201ENST00000617362 122 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AC018755.4-201ENST00000619715 454 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AP000676.4-201ENST00000624659 623 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 MTND4P8-201ENST00000514997 1362 ntBASIC2.61□□□□□ -1.99
VPS29Q9UBQ0 AC092447.7-201ENST00000422212 1621 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 SNORA18.3-201ENST00000384122 132 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 SNORA44-201ENST00000384584 132 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RPL21P75-201ENST00000396599 483 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 DSTNP4-201ENST00000399472 474 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RPL21P28-201ENST00000401418 483 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AL592114.1-201ENST00000403842 483 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RAD23BP2-201ENST00000416003 1207 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 USP9YP36-201ENST00000424581 829 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC109583.1-201ENST00000432156 268 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC112220.1-201ENST00000434628 355 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 MRPL50P4-201ENST00000446432 475 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 NANOGNBP1-201ENST00000448444 480 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 OR6K1P-201ENST00000456766 971 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RPL21P39-201ENST00000463605 483 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC011979.1-201ENST00000472300 483 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RPL21P93-201ENST00000480465 489 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RN7SL499P-201ENST00000481141 276 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC233702.1-201ENST00000482905 502 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RPL9P33-201ENST00000484311 566 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC087190.1-201ENST00000484462 480 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC093591.1-201ENST00000491435 481 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 RPL21P16-201ENST00000495531 483 ntBASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS29Q9UBQ0 OR4A45P-201ENST00000529954 901 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms