Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MTND1P2-201ENST00000430604 821 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC011998.1-201ENST00000433403 117 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 ARPC3P5-201ENST00000448802 534 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 MTCO3P2-201ENST00000457365 171 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC092757.1-201ENST00000467293 467 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AP000893.1-201ENST00000474462 794 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC106872.3-201ENST00000495104 446 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 RPL30P11-201ENST00000495304 339 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC108064.1-201ENST00000513791 460 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 SNORA70.14-201ENST00000516205 110 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 IGKV2-23-201ENST00000518729 323 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 OR5M7P-201ENST00000526140 972 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC124947.2-202ENST00000552735 133 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 RPS3AP4-201ENST00000555161 764 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC006960.3-201ENST00000561845 705 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 SNORA59B-202ENST00000578183 701 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 BNIP3P11-201ENST00000603878 563 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AF250324.2-201ENST00000608299 610 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AL159169.3-201ENST00000608871 561 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AC103710.4-201ENST00000609301 899 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 MLECP1-201ENST00000615893 709 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 AL356321.1-201ENST00000621360 228 ntBASIC4.49□□□□□ -1.69
DKK3Q9UBP4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
DKK3Q9UBP4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC107081.3-201ENST00000612715 2034 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AMD1P2-201ENST00000412936 992 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC234779.1-201ENST00000425910 285 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AL031736.2-201ENST00000426573 787 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 BX890604.2-201ENST00000427883 474 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 PGBD4P3-201ENST00000440731 581 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AL353748.1-201ENST00000440753 474 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC114495.1-201ENST00000441274 436 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 GDI2P2-201ENST00000445131 608 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AL451050.1-201ENST00000450126 415 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 DHFRP3-201ENST00000455595 559 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 RN7SL98P-201ENST00000462271 300 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC011276.1-201ENST00000469688 323 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 RPS3AP17-201ENST00000472594 777 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 RN7SL41P-201ENST00000476144 297 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC022447.3-201ENST00000506865 495 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC093840.1-201ENST00000511599 336 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 EIF5A2P1-201ENST00000564027 460 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 BNIP3P23-201ENST00000599655 511 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC244505.7-201ENST00000599675 272 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC079587.1-201ENST00000603846 277 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC112191.3-201ENST00000604371 277 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AP000860.1-201ENST00000605250 559 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC104010.1-201ENST00000616889 150 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC138649.3-201ENST00000622154 254 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC091905.2-201ENST00000623143 306 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 AC117529.2-201ENST00000512159 2068 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 XPOTP1-201ENST00000443317 2398 ntBASIC4.48□□□□□ -1.69
DKK3Q9UBP4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
DKK3Q9UBP4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.47□□□□□ -1.69
DKK3Q9UBP4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
DKK3Q9UBP4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.47□□□□□ -1.69
DKK3Q9UBP4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms