Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL162574.2-201ENST00000614618 657 ntBASIC2.8□□□□□ -1.96
VAPAQ9P0L0 AC068722.2-201ENST00000618734 544 ntBASIC2.8□□□□□ -1.96
VAPAQ9P0L0 GABRG2-229ENST00000641017 3628 ntBASIC2.8□□□□□ -1.96
VAPAQ9P0L0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.8□□□□□ -1.96
VAPAQ9P0L0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 MIR22-201ENST00000362190 85 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 RNU1-35P-201ENST00000362782 153 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 RNU6-921P-201ENST00000384361 107 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 MIR649-201ENST00000384843 97 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 PTMAP2-201ENST00000397627 327 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL158825.1-201ENST00000414735 521 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL353678.1-201ENST00000422735 741 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC091862.1-201ENST00000438016 1100 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC092170.1-201ENST00000440211 356 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL592437.1-201ENST00000443781 492 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL445669.2-201ENST00000454425 421 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 BTF3P5-201ENST00000457252 467 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC117440.1-201ENST00000474107 571 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC015908.1-201ENST00000478739 476 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 MTCYBP37-201ENST00000510642 1133 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 SNORA48.9-201ENST00000516419 162 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC104986.1-201ENST00000517978 436 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC126177.3-201ENST00000551839 688 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC095057.3-201ENST00000567102 1157 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC074051.3-201ENST00000570238 358 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL606834.2-201ENST00000602954 668 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC079880.2-201ENST00000603790 1213 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 RMST_10.1-201ENST00000616309 154 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC073968.1-201ENST00000618594 637 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC098679.5-201ENST00000624394 571 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 AC093010.3-201ENST00000570269 15214 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
VAPAQ9P0L0 ZNF807-201ENST00000328088 1707 ntBASIC2.79□□□□□ -1.96
VAPAQ9P0L0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 ASNSP3-201ENST00000451989 1306 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 RNU6-821P-201ENST00000390995 107 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AC233728.2-201ENST00000425348 757 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AC079780.1-201ENST00000428259 207 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AC005326.1-201ENST00000429197 123 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AL162389.1-201ENST00000449233 177 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 RNA5SP76-201ENST00000516277 87 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 IGJP1-201ENST00000522682 475 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 MIR5680-201ENST00000577577 84 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AP001330.4-201ENST00000604350 154 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AC069234.5-201ENST00000611056 416 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 Z99129.2-201ENST00000619967 314 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AL360181.4-201ENST00000621752 134 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AC006111.3-201ENST00000622137 383 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 U6.105-201ENST00000637379 88 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VAPAQ9P0L0 AC024341.1-201ENST00000526444 1552 ntBASIC2.78□□□□□ -1.96
VAPAQ9P0L0 MTCO1P12-201ENST00000414273 1543 ntBASIC2.78□□□□□ -1.97
VAPAQ9P0L0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.97
VAPAQ9P0L0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 MTCO1P6-201ENST00000481192 1384 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC111188.2-201ENST00000529697 1387 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 RPL9P7-201ENST00000330965 580 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 MIR183-201ENST00000384958 110 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 MIR134-201ENST00000385258 73 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms