Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AL160394.1-201ENST00000624765 724 ntBASIC1.8□□□□□ -2.12
SMCO4Q9NRQ5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SMCO4Q9NRQ5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
SMCO4Q9NRQ5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
SMCO4Q9NRQ5 AC087565.3-202ENST00000642085 1603 ntBASIC1.8□□□□□ -2.12
SMCO4Q9NRQ5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 RNA5SP139-201ENST00000364340 117 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AL591416.1-201ENST00000404015 867 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AL356379.1-201ENST00000414105 126 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 RPL37P1-201ENST00000432310 284 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AL451074.3-201ENST00000437709 472 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AL590664.1-201ENST00000448065 339 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AL139109.1-201ENST00000455491 297 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC087879.1-201ENST00000474343 374 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC090453.1-201ENST00000495560 436 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 MTCO2P9-201ENST00000503214 694 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 CENPUP2-201ENST00000555897 1186 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC025281.1-201ENST00000567026 265 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC026422.1-201ENST00000623961 452 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AP000526.1-201ENST00000603308 1388 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 AC110792.3-201ENST00000595906 1614 ntBASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SMCO4Q9NRQ5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AP001350.1-201ENST00000601906 1524 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 ZNF833P-201ENST00000424938 1494 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 SNORD62.1-201ENST00000362541 86 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 RNU6-335P-201ENST00000364563 113 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 OR5H15-201ENST00000383696 930 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 SNORA11C-201ENST00000408532 129 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AC004022.2-201ENST00000413824 193 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 CDC27P1-201ENST00000445384 715 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 BTF3P5-201ENST00000457252 467 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 LINC00888-204ENST00000487386 421 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 CDH12P4-201ENST00000517835 295 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 CDH12P3-201ENST00000517935 295 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 CDH12P1-201ENST00000518435 295 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 MIR4658-201ENST00000584344 65 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AC009220.3-201ENST00000604318 586 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AL159169.3-201ENST00000608871 561 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AC084036.1-201ENST00000609190 508 ntBASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.78□□□□□ -2.12
SMCO4Q9NRQ5 AL049781.1-201ENST00000623195 3585 ntBASIC1.78□□□□□ -2.13
SMCO4Q9NRQ5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 RNU6-50P-201ENST00000362356 103 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 RNU6-1072P-201ENST00000384703 107 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 RNU6-443P-201ENST00000384780 107 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 SNORA46.1-201ENST00000391069 153 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 RN7SKP263-201ENST00000411194 309 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 SDR42E1P3-201ENST00000438345 502 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 GPM6BP3-201ENST00000442797 145 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AL133547.1-201ENST00000448546 220 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AC006445.1-201ENST00000491925 405 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AC019227.1-201ENST00000526902 510 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 OR4K7P-201ENST00000580232 945 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AC090616.3-201ENST00000582184 217 ntBASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.77□□□□□ -2.13
SMCO4Q9NRQ5 GMCL1P2-201ENST00000605230 823 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms