Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 NUP58P1-201ENST00000502546 1738 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 Y_RNA.326-201ENST00000365176 113 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 Y_RNA.394-201ENST00000383942 103 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 RNU6-456P-201ENST00000384493 107 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 RNU1-82P-201ENST00000390851 165 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 MRPL50P2-201ENST00000416821 482 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 RPL36AP36-201ENST00000418616 301 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 NDUFA5P4-201ENST00000436704 385 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 FAM103A2P-201ENST00000444122 354 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC079168.2-201ENST00000453977 416 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 RPL7P22-201ENST00000466005 733 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 RPL30P11-201ENST00000495304 339 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC023424.1-201ENST00000496058 459 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 RNU6-835P-201ENST00000516974 104 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 RNU6-201P-201ENST00000517100 61 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AP003072.1-201ENST00000531740 145 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC243972.3-201ENST00000539655 198 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC037471.2-201ENST00000564941 598 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 CYCSP40-201ENST00000575927 294 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 BBIP1P1-201ENST00000602999 279 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC011468.4-201ENST00000603942 409 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC090948.1-201ENST00000607464 549 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC024940.5-201ENST00000622889 474 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC034229.5-201ENST00000624258 185 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AC097504.1-201ENST00000515103 2415 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM7Q9NR12 AL645937.1-201ENST00000641739 1652 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL031119.1-201ENST00000404707 1879 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RNU5E-1-201ENST00000362477 120 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RNU6-359P-201ENST00000365466 108 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 Y_RNA.419-201ENST00000384041 102 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RPS4XP8-201ENST00000402039 771 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 PRRC2CP1-201ENST00000404428 159 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL445189.1-201ENST00000405722 338 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 PRELID3BP11-201ENST00000414230 479 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC140479.3-201ENST00000418944 1126 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RPS12P10-201ENST00000427031 377 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL606489.2-201ENST00000433886 234 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 KCTD9P3-201ENST00000434597 1169 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 Z95327.1-201ENST00000446082 482 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC002381.1-201ENST00000447049 280 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL136380.1-201ENST00000447970 162 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RN7SL303P-201ENST00000469773 251 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RPL7P19-201ENST00000469948 618 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC090686.1-201ENST00000481577 749 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RNU6-714P-201ENST00000516963 103 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 MIR2116-201ENST00000517221 80 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms