Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC120349.2-201ENST00000625002 298 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 MTND4P26-201ENST00000415971 1359 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC011978.2-201ENST00000569835 2054 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 ZNF37BP-203ENST00000452306 1352 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 RNU6-216P-201ENST00000363282 104 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 RNU4-40P-201ENST00000364351 143 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 Y_RNA.408-201ENST00000383987 102 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 RNU6-1293P-201ENST00000384077 107 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AL590084.2-201ENST00000401481 382 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 RPS3AP9-201ENST00000417027 792 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 UBE2D3P1-201ENST00000436669 444 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 MTND2P20-201ENST00000440805 661 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 MTCO1P48-201ENST00000448024 1096 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC010469.1-201ENST00000463864 576 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 BET1P1-201ENST00000482276 359 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 RPL7P38-201ENST00000488396 739 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC021146.8-201ENST00000507455 733 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 RN7SKP209-201ENST00000516888 304 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 SULT1C2P1-202ENST00000562418 459 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC006539.2-201ENST00000601729 572 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC103881.1-201ENST00000603476 538 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 DUXAP11-201ENST00000603858 526 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC245297.2-201ENST00000610119 565 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC015813.4-201ENST00000610469 179 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC105429.2-201ENST00000610567 517 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 RNU6-156P-201ENST00000621869 107 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 AC079248.2-201ENST00000623779 326 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.2□□□□□ -1.74
DDX4Q9NQI0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX4Q9NQI0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 ZNF33CP-201ENST00000432492 2030 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 RNU6-921P-201ENST00000384361 107 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 RNU6-1122P-201ENST00000384449 107 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC068533.2-201ENST00000411872 306 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC090960.1-201ENST00000421072 306 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AL022400.1-201ENST00000423946 935 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC096632.1-201ENST00000427395 310 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 USP9YP7-201ENST00000436723 430 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AL606662.1-201ENST00000445763 553 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 USP9YP32-201ENST00000452432 430 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC013828.1-201ENST00000481845 158 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC069499.1-201ENST00000489433 509 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC093663.1-201ENST00000497190 394 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC139783.2-201ENST00000504847 1145 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC004069.2-201ENST00000505438 1114 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 SNX5P1-201ENST00000505757 1041 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 RN7SKP57-201ENST00000517248 293 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 IGKV2-26-201ENST00000518305 343 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC125611.1-201ENST00000549563 229 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC090888.1-201ENST00000561335 1141 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC090616.2-202ENST00000584248 222 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC004987.4-201ENST00000603383 338 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms