Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL139174.1-201ENST00000531489 886 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AL163153.1-201ENST00000554223 283 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC107954.1-201ENST00000565906 727 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC012493.2-201ENST00000595083 291 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC022146.1-201ENST00000595307 847 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC025588.3-201ENST00000604182 274 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AL513477.2-201ENST00000607858 568 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 VIS1.1-201ENST00000610517 203 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AL354976.1-201ENST00000613843 387 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AP003485.1-201ENST00000625093 753 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC004808.1-201ENST00000627671 721 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AL732372.2-225ENST00000642124 456 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 AP001350.1-201ENST00000601906 1524 ntBASIC3.58□□□□□ -1.84
HPS4Q9NQG7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.58□□□□□ -1.84
HPS4Q9NQG7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 RPL7P26-201ENST00000333817 754 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 MT-TC-201ENST00000387405 66 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AL138880.1-201ENST00000405824 642 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AL023807.1-201ENST00000407932 359 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 HMGB3P23-201ENST00000414981 585 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 MTND4P3-201ENST00000417829 541 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 RPS6P14-201ENST00000425165 719 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 MOB1AP1-201ENST00000430903 535 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 SDR42E1P3-201ENST00000438345 502 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC241584.1-201ENST00000438469 1241 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 ELOCP13-201ENST00000443934 329 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 MTCO3P2-201ENST00000457365 171 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AL136126.1-201ENST00000473603 402 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC093752.1-206ENST00000511823 336 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AP000889.1-201ENST00000530968 660 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AP001317.1-201ENST00000531194 960 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 RPL21P12-201ENST00000559810 515 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AL022067.1-201ENST00000602426 454 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AL365503.1-201ENST00000605247 905 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC008121.2-201ENST00000614647 523 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC130650.2-201ENST00000618736 2403 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AL157770.1-201ENST00000623049 439 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.57□□□□□ -1.84
HPS4Q9NQG7 AL356274.2-201ENST00000624379 3752 ntBASIC3.57□□□□□ -1.84
HPS4Q9NQG7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 RNU6-1066P-201ENST00000363573 105 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 RNU6-707P-201ENST00000364647 95 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 Y_RNA.578-201ENST00000390903 88 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AL079342.2-201ENST00000403367 482 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 U3.39-201ENST00000408569 239 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 RN7SKP111-201ENST00000410349 271 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC091862.1-201ENST00000438016 1100 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 RPL23AP16-201ENST00000441715 421 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC010301.1-201ENST00000473936 355 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC012181.1-201ENST00000479895 423 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 RN7SKP116-201ENST00000516902 319 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC010376.1-201ENST00000522101 334 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC008489.1-201ENST00000524271 483 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 ZNF705CP-201ENST00000530515 889 ntBASIC3.56□□□□□ -1.84
HPS4Q9NQG7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.56□□□□□ -1.84
HPS4Q9NQG7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms