Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 Y_RNA.18-201ENST00000362461 102 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RNU1-85P-201ENST00000364127 164 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RNA5SP130-201ENST00000364431 114 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 Y_RNA.302-201ENST00000364997 102 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RNU1-64P-201ENST00000365443 163 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RNU6-1226P-201ENST00000384317 107 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 MIR649-201ENST00000384843 97 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RPL23AP39-201ENST00000415533 405 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC108032.1-201ENST00000416706 207 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 Z99497.1-201ENST00000421282 135 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AL049610.1-201ENST00000423374 372 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AL590399.6-201ENST00000446396 307 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 KLRA1P-201ENST00000503499 986 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 MTCO3P7-201ENST00000510008 774 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 HIGD1AP3-201ENST00000515857 278 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC060788.1-201ENST00000521318 469 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RFPL1S-203ENST00000539579 330 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 OR6C73P-201ENST00000546432 358 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AL389895.1-201ENST00000554127 252 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC012435.1-202ENST00000568772 240 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 ROCK1P1-201ENST00000573767 549 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC008507.1-201ENST00000587506 734 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC093227.2-201ENST00000589357 285 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC025165.5-201ENST00000602802 578 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 SNORA62.6-201ENST00000606322 83 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RN7SKP299-201ENST00000606679 301 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AP001521.1-201ENST00000609150 300 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC078899.5-201ENST00000612475 178 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 MIR7844-201ENST00000616161 122 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 U7.8-201ENST00000619968 63 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC008443.7-201ENST00000622195 246 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC127502.3-201ENST00000636170 1206 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 PNPT1P2-201ENST00000456768 2050 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC117529.2-201ENST00000512159 2068 ntBASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC52A3Q9NQ40 AC073073.2-201ENST00000609827 2578 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 AC090337.1-201ENST00000579651 2074 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 AL121657.1-201ENST00000327215 531 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 RNU6-433P-201ENST00000363216 104 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 Y_RNA.126-201ENST00000363382 111 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 SOD2P1-201ENST00000396543 562 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 AL022722.2-201ENST00000402519 180 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 SNORA11-201ENST00000408789 128 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 RNU6-628P-201ENST00000410675 107 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 RPL7P8-201ENST00000411964 730 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 USP9YP33-201ENST00000412220 421 ntBASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC52A3Q9NQ40 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms