Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
EFCC1Q9HA90 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
EFCC1Q9HA90 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.12□□□□□ -1.43
EFCC1Q9HA90 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
EFCC1Q9HA90 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
EFCC1Q9HA90 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
EFCC1Q9HA90 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC068538.1-201ENST00000376856 336 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 Y_RNA.395-201ENST00000383945 109 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 RPL17P36-201ENST00000420302 549 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC005517.2-201ENST00000424673 553 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC096632.1-201ENST00000427395 310 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 MTCYBP9-201ENST00000431021 303 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 OR4K11P-201ENST00000431829 904 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AL356010.1-201ENST00000456364 102 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 RPL30P15-201ENST00000457129 321 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC058823.1-201ENST00000485315 474 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC011005.3-201ENST00000491624 395 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 SMURF2P1-201ENST00000514992 481 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 APOOP3-201ENST00000536787 586 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC122688.1-201ENST00000541494 223 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AL117187.1-201ENST00000555482 181 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC068831.4-201ENST00000556118 109 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC026470.2-201ENST00000561492 181 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 OR4K8P-201ENST00000578842 1048 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 OR6R2P-201ENST00000609216 300 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 RMST_9.1-201ENST00000619945 193 ntBASIC6.11□□□□□ -1.43
EFCC1Q9HA90 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
EFCC1Q9HA90 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 Y_RNA.100-201ENST00000363141 102 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 Y_RNA.187-201ENST00000363918 113 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 RNU6-606P-201ENST00000384721 111 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 GLULP6-201ENST00000399502 913 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 HSPA8P15-201ENST00000401676 786 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 DDX3P2-201ENST00000446138 111 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AC107399.1-201ENST00000451226 265 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 HMGB1P4-201ENST00000455362 567 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AL583843.1-201ENST00000456070 346 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AL135752.1-201ENST00000479477 471 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AC026979.1-201ENST00000492525 396 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AC090453.1-201ENST00000495560 436 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 RNU6-1038P-201ENST00000516516 104 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AC134698.5-201ENST00000519444 336 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AP000654.2-201ENST00000605633 586 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.1□□□□□ -1.43
EFCC1Q9HA90 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
EFCC1Q9HA90 AP001350.1-201ENST00000601906 1524 ntBASIC6.09□□□□□ -1.43
EFCC1Q9HA90 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
EFCC1Q9HA90 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
EFCC1Q9HA90 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
EFCC1Q9HA90 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
EFCC1Q9HA90 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.09□□□□□ -1.43
EFCC1Q9HA90 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
EFCC1Q9HA90 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms