Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 FO393414.1-201ENST00000428697 1184 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 Z77249.1-201ENST00000444622 1175 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 RPL37P4-201ENST00000448908 268 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AL035407.2-201ENST00000454090 378 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 GTF2IP12-201ENST00000456547 356 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 snoU13.7-201ENST00000459220 104 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 ST13P14-201ENST00000474095 734 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 RNA5SP217-201ENST00000515959 91 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 IGHV3-76-201ENST00000522465 295 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC083923.1-201ENST00000523708 376 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 MTND2P26-201ENST00000528255 1029 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AL845331.3-202ENST00000562856 261 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC126365.2-201ENST00000580630 379 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC144521.1-201ENST00000607148 956 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC007318.2-201ENST00000620999 243 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC139713.2-210ENST00000641741 992 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC007256.1-201ENST00000392253 2765 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC104446.1-201ENST00000613728 1321 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 RNU6-805P-201ENST00000365643 106 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 BTBD10P2-201ENST00000404779 676 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AL355615.1-201ENST00000406187 641 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 RPL7P8-201ENST00000411964 730 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 FABP5P3-201ENST00000437960 408 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 RPS26P56-201ENST00000444468 240 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC112492.1-201ENST00000449607 712 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AL096803.2-201ENST00000450032 677 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 SNORA59A-201ENST00000459326 152 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 RPL21P18-201ENST00000469899 480 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 VN1R17P-201ENST00000472048 1090 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 RPL12P22-201ENST00000519073 490 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AP003066.2-201ENST00000529375 555 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC139103.1-201ENST00000534696 1030 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC010198.2-201ENST00000550612 259 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 SYF2P1-201ENST00000550658 413 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 MIR3690-201ENST00000580266 75 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC090616.5-202ENST00000582111 297 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC096586.1-201ENST00000610267 561 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC006213.4-201ENST00000616184 634 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC007275.1-201ENST00000621243 671 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 AC092326.2-201ENST00000624772 1561 ntBASIC3.25□□□□□ -1.89
NXF3Q9H4D5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NXF3Q9H4D5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 ZNF542P-204ENST00000482727 1305 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 RNA5SP383-201ENST00000362934 120 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 UBE2V1P9-201ENST00000414760 368 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 AL590399.6-201ENST00000446396 307 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 AC233982.1-201ENST00000451247 436 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 MRPL35P4-201ENST00000453682 566 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.24□□□□□ -1.89
NXF3Q9H4D5 PRELID3BP6-201ENST00000503839 571 ntBASIC3.24□□□□□ -1.89
NXF3Q9H4D5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms