Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AL513477.2-201ENST00000607858 568 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AL137847.3-201ENST00000611521 109 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC105227.2-201ENST00000615075 605 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC009464.1-201ENST00000615731 469 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC099506.2-201ENST00000623074 221 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC009039.2-201ENST00000624524 529 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC097372.4-201ENST00000625025 466 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC138915.1-201ENST00000565427 1685 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 SNORA14A-201ENST00000364773 135 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 RNU6-1027P-201ENST00000383998 107 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 RN7SKP159-201ENST00000410657 292 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 UBE2V1P11-201ENST00000411559 285 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC096632.1-201ENST00000427395 310 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AL035410.1-201ENST00000427409 427 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AL445669.2-201ENST00000454425 421 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC034236.1-201ENST00000469891 373 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC015908.1-201ENST00000478739 476 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 GAPDHP39-201ENST00000481866 979 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 PRELID3BP6-201ENST00000503839 571 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC021678.1-201ENST00000505195 936 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC104108.1-201ENST00000509930 412 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC105914.1-201ENST00000511798 226 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 RNU1-95P-201ENST00000516357 160 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 RNU1-128P-201ENST00000516704 160 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AL121603.1-201ENST00000553815 142 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC007224.1-201ENST00000564410 144 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AC016911.1-201ENST00000613297 452 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 FRG1HP-204ENST00000617940 757 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 AL162233.1-201ENST00000620014 944 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 ZNF807-201ENST00000328088 1707 ntBASIC2.3□□□□□ -2.04
NKX6-2Q9C056 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX6-2Q9C056 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 CD24P4-201ENST00000382840 243 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 SNORA7.4-201ENST00000384249 137 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 RNU6-441P-201ENST00000384545 106 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 MIR512-1-201ENST00000384913 84 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 U3.42-201ENST00000408746 214 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 RNU4-65P-201ENST00000410473 140 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 TATDN1P1-201ENST00000414123 891 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AL389915.1-201ENST00000422463 466 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 RPP40P1-201ENST00000426762 456 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 SUMO1P4-201ENST00000429430 302 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AC016712.1-201ENST00000431088 378 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AC005019.1-201ENST00000436455 431 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 OR2A20P-203ENST00000498397 1268 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 OR7K1P-201ENST00000546439 926 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AC025918.2-201ENST00000558683 763 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 ATP5F1P7-201ENST00000567330 760 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 MIR3605-201ENST00000583214 100 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AP001029.3-201ENST00000588063 596 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AP001330.4-201ENST00000604350 154 ntBASIC2.29□□□□□ -2.04
NKX6-2Q9C056 AC016542.1-201ENST00000608259 493 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms