Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 AP001148.1-201ENST00000624124 2359 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 VTA1P1-201ENST00000414044 866 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 ISCA1P6-201ENST00000427740 390 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AC107222.1-201ENST00000510899 637 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 MIR5007-201ENST00000583098 95 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AC091488.1-201ENST00000604239 660 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AL627309.6-201ENST00000606857 840 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AL162233.1-201ENST00000620014 944 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AC009452.1-201ENST00000640823 606 ntBASIC3.55□□□□□ -1.84
SCAPERQ9BY12 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCAPERQ9BY12 AL356292.1-201ENST00000283110 373 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 NCSTNP1-201ENST00000406229 144 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 RPL23AP74-201ENST00000437246 471 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 AC018634.1-201ENST00000437554 401 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 MUPP-201ENST00000438111 566 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 AC104090.1-201ENST00000506341 1171 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 AC112673.1-201ENST00000513168 575 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCAPERQ9BY12 AC000367.1-201ENST00000452711 1766 ntBASIC3.54□□□□□ -1.84
SCAPERQ9BY12 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCAPERQ9BY12 SNORA26.7-201ENST00000391288 122 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AL158825.1-201ENST00000414735 521 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 RANP7-201ENST00000418085 644 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 DPPA2P1-201ENST00000428060 556 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AL606490.7-201ENST00000433136 191 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AC013410.1-201ENST00000436223 1232 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AC133134.1-201ENST00000466800 359 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.53□□□□□ -1.84
SCAPERQ9BY12 HSPE1P18-201ENST00000517602 280 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AC034268.2-201ENST00000571784 482 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AC061975.8-201ENST00000587058 721 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.53□□□□□ -1.84
SCAPERQ9BY12 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.53□□□□□ -1.84
SCAPERQ9BY12 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCAPERQ9BY12 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.53□□□□□ -1.84
SCAPERQ9BY12 SNORD21-201ENST00000383953 95 ntBASIC3.53□□□□□ -1.85
SCAPERQ9BY12 RN7SKP32-201ENST00000410167 303 ntBASIC3.53□□□□□ -1.85
SCAPERQ9BY12 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.53□□□□□ -1.85
SCAPERQ9BY12 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.53□□□□□ -1.85
SCAPERQ9BY12 RPS26P21-201ENST00000475397 348 ntBASIC3.53□□□□□ -1.85
SCAPERQ9BY12 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SCAPERQ9BY12 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.53□□□□□ -1.85
SCAPERQ9BY12 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SCAPERQ9BY12 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.53□□□□□ -1.85
SCAPERQ9BY12 NF1P5-201ENST00000588287 448 ntBASIC3.53□□□□□ -1.85
SCAPERQ9BY12 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.53□□□□□ -1.85
SCAPERQ9BY12 SEPT7P7-201ENST00000420492 1301 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC002543.1-201ENST00000299783 1954 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AL161781.1-201ENST00000354277 403 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 RNU6-1159P-201ENST00000362933 107 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AL513175.2-201ENST00000422071 443 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 COX6CP2-201ENST00000444980 225 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 NPM1P49-201ENST00000448027 714 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 MTCYBP28-201ENST00000566728 1132 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC005951.1-201ENST00000576706 485 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC023043.3-201ENST00000593113 385 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC016727.1-205ENST00000605437 569 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC131902.3-201ENST00000611767 581 ntBASIC3.52□□□□□ -1.85
SCAPERQ9BY12 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 AC011155.1-201ENST00000316512 456 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 MTCO2P17-201ENST00000424336 677 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 CACYBPP1-201ENST00000438592 684 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 HMGB1P48-201ENST00000446155 598 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 RPL36AP33-201ENST00000450395 310 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 MTCO3P11-201ENST00000455103 774 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 AC089999.1-201ENST00000460336 374 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 VN1R17P-201ENST00000472048 1090 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms