Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 HMGB1P30-201ENST00000492455 606 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC011979.2-201ENST00000527568 352 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC023442.1-201ENST00000531247 422 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AP000763.2-201ENST00000540641 163 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC128657.1-201ENST00000549459 145 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AL670379.11-201ENST00000604059 253 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AL670379.10-201ENST00000604330 253 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AL670379.12-201ENST00000605291 253 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AL670379.9-201ENST00000605428 253 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AC113194.1-201ENST00000606037 500 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 uc_338.12-201ENST00000616344 181 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AL162373.1-201ENST00000620433 407 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 AP005432.1-201ENST00000580891 3485 ntBASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSBP3Q9BWW4 PCAT14-202ENST00000627127 3935 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 RNA5SP507-201ENST00000363603 121 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 SNORD113-7-201ENST00000363762 77 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 SNORA74A-201ENST00000364089 198 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 Y_RNA.482-201ENST00000384377 111 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 MIR137-201ENST00000385223 102 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 PPIAP9-201ENST00000403866 498 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 RNA5SP345-201ENST00000410646 108 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 RNU4-61P-201ENST00000411243 107 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 HMGB3P2-201ENST00000411913 584 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AL133482.1-201ENST00000415988 498 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 RPL37P1-201ENST00000432310 284 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 FTLP19-201ENST00000433300 394 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 HMGB1P4-201ENST00000455362 567 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC079168.1-201ENST00000458741 345 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 RPS27P27-201ENST00000498779 255 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 RPS4XP20-201ENST00000505751 772 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC091912.1-201ENST00000511351 248 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 LSM3P2-201ENST00000551246 273 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 SETP2-201ENST00000553886 926 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC011477.5-201ENST00000586571 259 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC115085.1-201ENST00000588924 229 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AL121992.2-201ENST00000606262 256 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 RPSAP73-201ENST00000614820 330 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC244100.1-202ENST00000621554 382 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC018445.2-201ENST00000622987 260 ntBASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSBP3Q9BWW4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 SNORA17.1-201ENST00000362945 126 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 U3.2-201ENST00000362981 210 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms