Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.01□□□□□ -1.77
NPAS1Q99742 SNORD42A-201ENST00000459584 64 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 RPL7P15-201ENST00000461190 712 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.01□□□□□ -1.77
NPAS1Q99742 RPL7P24-201ENST00000493052 752 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 BNIP3P41-201ENST00000503774 571 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.01□□□□□ -1.77
NPAS1Q99742 CDC42P4-201ENST00000510507 563 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
NPAS1Q99742 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.01□□□□□ -1.77
NPAS1Q99742 RNU6-405P-201ENST00000516637 110 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 RNU6-1003P-201ENST00000517099 105 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AP000907.2-201ENST00000530827 353 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AC022880.1-201ENST00000534017 973 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.01□□□□□ -1.77
NPAS1Q99742 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AL157394.1-201ENST00000562983 1224 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AC060771.1-201ENST00000582031 164 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 MIR5096-201ENST00000583713 70 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AC009977.1-201ENST00000586015 570 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AC131902.3-201ENST00000611767 581 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AP005019.3-201ENST00000620418 560 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 AL603839.4-201ENST00000624658 1005 ntBASIC4.01□□□□□ -1.77
NPAS1Q99742 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS1Q99742 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS1Q99742 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS1Q99742 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS1Q99742 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS1Q99742 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS1Q99742 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS1Q99742 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.01□□□□□ -1.77
NPAS1Q99742 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS1Q99742 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
NPAS1Q99742 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4□□□□□ -1.77
NPAS1Q99742 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 PNPT1P2-201ENST00000456768 2050 ntBASIC4□□□□□ -1.77
NPAS1Q99742 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 MIR331-201ENST00000362302 94 ntBASIC4□□□□□ -1.77
NPAS1Q99742 RNY4P34-201ENST00000364779 95 ntBASIC4□□□□□ -1.77
NPAS1Q99742 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPAS1Q99742 U3.20-201ENST00000390909 217 ntBASIC4□□□□□ -1.77
NPAS1Q99742 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 AC097374.1-203ENST00000400783 485 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4□□□□□ -1.77
NPAS1Q99742 MTCO1P21-201ENST00000416634 589 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AL356387.2-201ENST00000422272 243 ntBASIC4□□□□□ -1.77
NPAS1Q99742 DNAJC19P7-201ENST00000428811 344 ntBASIC4□□□□□ -1.77
NPAS1Q99742 MTND1P34-201ENST00000438556 671 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC073614.1-201ENST00000438690 650 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4□□□□□ -1.77
NPAS1Q99742 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4□□□□□ -1.77
NPAS1Q99742 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4□□□□□ -1.77
NPAS1Q99742 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4□□□□□ -1.77
NPAS1Q99742 snoU109.4-201ENST00000458953 143 ntBASIC4□□□□□ -1.77
NPAS1Q99742 S100A11P1-201ENST00000477525 312 ntBASIC4□□□□□ -1.77
NPAS1Q99742 MTCO2P32-201ENST00000514865 403 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4□□□□□ -1.77
NPAS1Q99742 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4□□□□□ -1.77
NPAS1Q99742 TRAV8-5-201ENST00000537369 341 ntBASIC4□□□□□ -1.77
NPAS1Q99742 RPL21P5-201ENST00000554662 472 ntBASIC4□□□□□ -1.77
NPAS1Q99742 MIR4528-201ENST00000577763 90 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4□□□□□ -1.77
NPAS1Q99742 AL354984.3-201ENST00000604803 325 ntBASIC4□□□□□ -1.77
NPAS1Q99742 HMGN2P28-201ENST00000606102 262 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC013562.2-201ENST00000611632 603 ntBASIC4□□□□□ -1.77
NPAS1Q99742 Z99129.1-201ENST00000612510 255 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC005332.10-201ENST00000612725 619 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AP001506.1-201ENST00000615444 211 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC026585.1-201ENST00000619582 524 ntBASIC4□□□□□ -1.77
NPAS1Q99742 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4□□□□□ -1.77
NPAS1Q99742 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4□□□□□ -1.77
NPAS1Q99742 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4□□□□□ -1.77
NPAS1Q99742 DPY19L2P2-203ENST00000435536 1858 ntBASIC4□□□□□ -1.77
NPAS1Q99742 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS1Q99742 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4□□□□□ -1.77
NPAS1Q99742 MTCO1P9-201ENST00000505577 1534 ntBASIC4□□□□□ -1.77
NPAS1Q99742 AC092447.7-201ENST00000422212 1621 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS1Q99742 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPAS1Q99742 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPAS1Q99742 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPAS1Q99742 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS1Q99742 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS1Q99742 FRG1BP-201ENST00000278882 761 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 Y_RNA.46-201ENST00000362695 102 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms