Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 OR1S2-201ENST00000302592 978 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC073325.2-201ENST00000339545 159 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 RNU6-839P-201ENST00000363347 108 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 SNORA38.1-201ENST00000364172 131 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 RNU6-761P-201ENST00000384148 107 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 SNORD65.1-201ENST00000390889 71 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AL603766.1-201ENST00000407763 664 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AL008987.1-201ENST00000415528 237 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AL353678.1-201ENST00000422735 741 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 RPL7P34-201ENST00000433316 712 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 MTCO2P20-201ENST00000437339 673 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 COX7BP2-201ENST00000437976 242 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC006028.1-201ENST00000438379 402 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 FGF7P5-201ENST00000441829 291 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC004865.1-201ENST00000442276 1003 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 Z77249.1-201ENST00000444622 1175 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 RPS3AP43-201ENST00000479743 781 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 RN7SL20P-201ENST00000488827 297 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC109471.1-201ENST00000511631 612 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AL121603.1-201ENST00000553815 142 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AC023158.2-201ENST00000614876 543 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AP003072.4-201ENST00000624580 310 ntBASIC4.5□□□□□ -1.69
SIN3AQ96ST3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SIN3AQ96ST3 AL118496.1-201ENST00000440201 1812 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC007435.1-201ENST00000421086 415 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 Z93242.1-201ENST00000427102 353 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 MTCYBP31-201ENST00000438855 1122 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 RPL23AP76-201ENST00000441860 458 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC006539.3-201ENST00000454258 129 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC011352.3-201ENST00000505162 593 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC034244.1-201ENST00000507687 207 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC048346.1-201ENST00000510247 144 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC018797.3-201ENST00000513388 1241 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 MTND2P38-201ENST00000522536 667 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 UBTFL10-201ENST00000528532 562 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC022662.1-201ENST00000580252 331 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC017100.2-201ENST00000584628 355 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 NIFKP6-201ENST00000598115 845 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC025811.1-201ENST00000604312 472 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC069545.1-201ENST00000605671 358 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AC123768.4-201ENST00000616244 701 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 ATP5A1P2-202ENST00000616464 443 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 Z73965.1-201ENST00000623412 2297 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 AL133412.1-201ENST00000380194 2992 ntBASIC4.49□□□□□ -1.69
SIN3AQ96ST3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIN3AQ96ST3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIN3AQ96ST3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms