Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MTCYBP14-201ENST00000457471 715 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 AC103975.1-201ENST00000482506 483 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.78□□□□□ -1.8
IFT140Q96RY7 AL389895.1-201ENST00000554127 252 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 AC093673.2-201ENST00000609674 331 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.15-201ENST00000611544 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 CR589904.2-201ENST00000612533 440 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.16-201ENST00000613119 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.12-201ENST00000613778 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.20-201ENST00000613956 192 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.9-201ENST00000615427 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.11-201ENST00000616345 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.2-201ENST00000616535 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.3-201ENST00000617785 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.19-201ENST00000618602 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 RNU2-1-201ENST00000618664 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.6-201ENST00000619225 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.5-201ENST00000619465 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 U2.10-201ENST00000620268 191 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 FRG1DP-201ENST00000635586 771 ntBASIC3.78□□□□□ -1.8
IFT140Q96RY7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.77□□□□□ -1.81
IFT140Q96RY7 ATG3P1-201ENST00000419507 911 ntBASIC3.77□□□□□ -1.81
IFT140Q96RY7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.77□□□□□ -1.81
IFT140Q96RY7 CACYBPP1-201ENST00000438592 684 ntBASIC3.77□□□□□ -1.81
IFT140Q96RY7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.77□□□□□ -1.81
IFT140Q96RY7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.77□□□□□ -1.81
IFT140Q96RY7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.77□□□□□ -1.81
IFT140Q96RY7 AK6P1-201ENST00000540219 478 ntBASIC3.77□□□□□ -1.81
IFT140Q96RY7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.77□□□□□ -1.81
IFT140Q96RY7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.77□□□□□ -1.81
IFT140Q96RY7 AL391813.2-201ENST00000609113 322 ntBASIC3.77□□□□□ -1.81
IFT140Q96RY7 AC103710.1-201ENST00000610003 901 ntBASIC3.77□□□□□ -1.81
IFT140Q96RY7 AL450489.1-201ENST00000612071 468 ntBASIC3.77□□□□□ -1.81
IFT140Q96RY7 ZNF542P-204ENST00000482727 1305 ntBASIC3.77□□□□□ -1.81
IFT140Q96RY7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
IFT140Q96RY7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
IFT140Q96RY7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 SNORA67.3-201ENST00000384366 140 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 MIR221-201ENST00000385135 110 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 RNU6-328P-201ENST00000390887 106 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 RPS15AP6-201ENST00000420703 385 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 AL353729.1-201ENST00000425044 720 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 Z82205.1-201ENST00000428456 297 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 RPL7P54-201ENST00000438336 674 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.76□□□□□ -1.81
IFT140Q96RY7 MIR8070-201ENST00000616510 88 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 MIR6766-201ENST00000622641 72 ntBASIC3.76□□□□□ -1.81
IFT140Q96RY7 Y_RNA.269-201ENST00000364685 89 ntBASIC3.75□□□□□ -1.81
IFT140Q96RY7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
IFT140Q96RY7 RNU6-1140P-201ENST00000410517 106 ntBASIC3.75□□□□□ -1.81
IFT140Q96RY7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.75□□□□□ -1.81
IFT140Q96RY7 RPS26P30-201ENST00000443431 335 ntBASIC3.75□□□□□ -1.81
IFT140Q96RY7 AC072039.1-201ENST00000477611 581 ntBASIC3.75□□□□□ -1.81
IFT140Q96RY7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.75□□□□□ -1.81
IFT140Q96RY7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
IFT140Q96RY7 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.75□□□□□ -1.81
IFT140Q96RY7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.75□□□□□ -1.81
IFT140Q96RY7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.75□□□□□ -1.81
IFT140Q96RY7 AC006254.3-201ENST00000603353 884 ntBASIC3.75□□□□□ -1.81
IFT140Q96RY7 AC017076.1-201ENST00000607613 578 ntBASIC3.75□□□□□ -1.81
IFT140Q96RY7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.75□□□□□ -1.81
IFT140Q96RY7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
IFT140Q96RY7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
IFT140Q96RY7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
IFT140Q96RY7 RPL7P53-201ENST00000421245 739 ntBASIC3.74□□□□□ -1.81
IFT140Q96RY7 MTATP6P11-201ENST00000428071 670 ntBASIC3.74□□□□□ -1.81
IFT140Q96RY7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.74□□□□□ -1.81
IFT140Q96RY7 SCARNA16.3-201ENST00000516595 184 ntBASIC3.74□□□□□ -1.81
IFT140Q96RY7 GNAI2P1-201ENST00000541815 315 ntBASIC3.74□□□□□ -1.81
IFT140Q96RY7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
IFT140Q96RY7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.74□□□□□ -1.81
IFT140Q96RY7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.74□□□□□ -1.81
IFT140Q96RY7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.74□□□□□ -1.81
IFT140Q96RY7 AC128687.1-201ENST00000605304 619 ntBASIC3.74□□□□□ -1.81
IFT140Q96RY7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
IFT140Q96RY7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
IFT140Q96RY7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
IFT140Q96RY7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.74□□□□□ -1.81
IFT140Q96RY7 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 XIAPP3-201ENST00000312918 795 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 AC009414.1-201ENST00000427200 443 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 RPS15AP28-201ENST00000435088 386 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 RN7SL297P-201ENST00000483161 293 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 XKRY-201ENST00000510392 1100 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 OR7K1P-201ENST00000546439 926 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 AL845331.3-202ENST00000562856 261 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms