Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 H2AFZP5-201ENST00000446960 382 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 NFU1P2-201ENST00000448700 469 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC013356.1-201ENST00000489027 564 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC108475.1-201ENST00000507880 950 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC015795.1-201ENST00000513669 327 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AP003181.2-201ENST00000528941 181 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 CKS1BP3-201ENST00000600888 237 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AP000907.4-201ENST00000604143 237 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC025588.3-201ENST00000604182 274 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC069234.5-201ENST00000611056 416 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AC097714.1-201ENST00000511272 1647 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AL442639.1-201ENST00000625030 1899 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX18Q96RF0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.19□□□□□ -1.74
SNX18Q96RF0 AL049780.3-201ENST00000624612 1583 ntBASIC4.19□□□□□ -1.74
SNX18Q96RF0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 GNG5P1-201ENST00000255500 204 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 OR4K15-201ENST00000305051 1216 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL161781.1-201ENST00000354277 403 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 RNU6-853P-201ENST00000364306 107 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 RNU6-878P-201ENST00000384578 110 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 MIR192-201ENST00000384915 110 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 RNU6-780P-201ENST00000391030 104 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 RN7SKP267-201ENST00000410381 285 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 RNU4-55P-201ENST00000410731 137 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL591848.1-201ENST00000413092 322 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC245028.1-201ENST00000423259 256 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL590233.1-201ENST00000430017 456 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC000111.3-201ENST00000433478 193 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL356276.2-201ENST00000435919 558 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 FAM103A2P-201ENST00000444122 354 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC079448.1-201ENST00000449377 373 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 HMGB1P15-201ENST00000453854 435 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC079168.2-201ENST00000453977 416 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC034222.1-201ENST00000494052 532 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC091868.1-201ENST00000508746 304 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC009646.1-201ENST00000510455 318 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC090151.1-201ENST00000520784 730 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 IFITM8P-201ENST00000522529 394 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC022790.1-201ENST00000522872 204 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 FAM92A1P1-201ENST00000528023 890 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 MIR4737-201ENST00000583979 81 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC011451.2-201ENST00000604303 598 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms