Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC135068.12-201ENST00000637370 931 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 MAPK10-328ENST00000641553 4009 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD1Q96NR3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AL139276.1-201ENST00000311910 1001 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 SNORA17.1-201ENST00000362945 126 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RNU6-511P-201ENST00000363496 107 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RNA5SP90-201ENST00000364801 99 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RNU6-43P-201ENST00000384302 107 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RNA5SP241-201ENST00000391326 114 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RNU2-29P-201ENST00000410423 189 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RNU2-39P-201ENST00000410604 198 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC079809.1-201ENST00000415468 276 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 MTCO2P27-201ENST00000420740 428 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RPL7AP49-201ENST00000429522 581 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AL591438.1-201ENST00000433508 581 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RPL19P16-201ENST00000433839 588 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 GTF2IP13-201ENST00000438487 386 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 CBX1P2-201ENST00000453841 458 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RNU7-59P-201ENST00000459101 61 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC005532.2-201ENST00000467154 373 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RN7SL189P-201ENST00000468631 289 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RPL23AP11-201ENST00000475260 469 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC023424.1-201ENST00000496058 459 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC008953.1-201ENST00000497334 318 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 SNRPCP2-201ENST00000504370 475 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 BTF3P13-201ENST00000513224 490 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 RNU6-798P-201ENST00000516912 103 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AP000857.1-201ENST00000532151 543 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC006504.6-201ENST00000590142 199 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AC116312.1-201ENST00000606841 314 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 AP000843.1-201ENST00000624880 701 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 NXPH1-205ENST00000602349 1953 ntBASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD1Q96NR3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AL450326.2-201ENST00000421913 1962 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AL450345.1-202ENST00000605741 3881 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 RNU6-522P-201ENST00000364497 107 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 SNORA4.3-201ENST00000365564 137 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 RNU6-1029P-201ENST00000384109 107 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 MIR559-201ENST00000385188 96 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 RPL26P29-201ENST00000415623 438 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 BRWD1P3-201ENST00000428816 390 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 LYPLA1P1-201ENST00000434514 622 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AL589765.3-201ENST00000446084 462 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 RN7SL727P-201ENST00000482164 296 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 MTCO1P29-201ENST00000496868 288 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC006427.1-201ENST00000514359 712 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 RNU6-559P-201ENST00000516151 98 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms