Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC006206.1-201ENST00000544842 3387 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.06□□□□□ -1.44
CALR3Q96L12 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.05□□□□□ -1.44
CALR3Q96L12 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CALR3Q96L12 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.05□□□□□ -1.44
CALR3Q96L12 AL049555.1-201ENST00000562834 1933 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
CALR3Q96L12 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CALR3Q96L12 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
CALR3Q96L12 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.05□□□□□ -1.44
CALR3Q96L12 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.05□□□□□ -1.44
CALR3Q96L12 AL139397.2-201ENST00000404529 772 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 AL583834.1-201ENST00000406943 343 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.05□□□□□ -1.44
CALR3Q96L12 GPS2P1-201ENST00000411761 986 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.05□□□□□ -1.44
CALR3Q96L12 GPM6BP2-201ENST00000432046 144 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 AL591704.1-201ENST00000432574 275 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 SNAP23P1-201ENST00000433229 246 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.05□□□□□ -1.44
CALR3Q96L12 GPM6BP1-201ENST00000446387 144 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.05□□□□□ -1.44
CALR3Q96L12 HMGB3P22-202ENST00000451823 572 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.05□□□□□ -1.44
CALR3Q96L12 Y_RNA.653-201ENST00000459091 95 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.05□□□□□ -1.44
CALR3Q96L12 RN7SKP60-201ENST00000516985 239 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.05□□□□□ -1.44
CALR3Q96L12 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.05□□□□□ -1.44
CALR3Q96L12 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.05□□□□□ -1.44
CALR3Q96L12 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CALR3Q96L12 AP004609.2-201ENST00000532177 190 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 AC122688.1-201ENST00000541494 223 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.05□□□□□ -1.44
CALR3Q96L12 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CALR3Q96L12 AL138726.1-201ENST00000614873 333 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 uc_338.31-201ENST00000615595 186 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 AC244517.12-201ENST00000623581 663 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.05□□□□□ -1.44
CALR3Q96L12 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CALR3Q96L12 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CALR3Q96L12 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CALR3Q96L12 AC139769.1-204ENST00000472297 1931 ntBASIC6.05□□□□□ -1.44
CALR3Q96L12 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CALR3Q96L12 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CALR3Q96L12 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.05□□□□□ -1.44
CALR3Q96L12 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CALR3Q96L12 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CALR3Q96L12 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.04□□□□□ -1.44
CALR3Q96L12 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 AP001029.2-203ENST00000589795 4910 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 ZNF519P1-201ENST00000449011 1626 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 Y_RNA.135-201ENST00000363439 95 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 RNU6-1188P-201ENST00000363795 107 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.04□□□□□ -1.44
CALR3Q96L12 SNORA51.8-201ENST00000384234 132 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 MIR130A-201ENST00000385274 89 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 CISD1P1-201ENST00000393907 327 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 AC079809.1-201ENST00000415468 276 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 RPLP0P7-201ENST00000416050 667 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.04□□□□□ -1.44
CALR3Q96L12 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.04□□□□□ -1.44
CALR3Q96L12 FAR2P4-202ENST00000425399 584 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.04□□□□□ -1.44
CALR3Q96L12 RPL32P28-201ENST00000443577 397 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.04□□□□□ -1.44
CALR3Q96L12 AC009963.3-201ENST00000458090 486 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.04□□□□□ -1.44
CALR3Q96L12 RPS17P15-201ENST00000475609 349 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 AC079140.5-201ENST00000507882 310 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 AC008526.1-201ENST00000509149 338 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 RNU4-60P-201ENST00000517239 135 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.04□□□□□ -1.44
CALR3Q96L12 BNIP3P5-201ENST00000562290 498 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.04□□□□□ -1.44
CALR3Q96L12 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.04□□□□□ -1.44
CALR3Q96L12 AC016925.2-201ENST00000605108 242 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 MIR6793-201ENST00000612376 63 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 MIR6823-201ENST00000622118 61 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 AC015871.5-202ENST00000623252 701 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.04□□□□□ -1.44
CALR3Q96L12 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.04□□□□□ -1.44
CALR3Q96L12 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.04□□□□□ -1.44
CALR3Q96L12 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CALR3Q96L12 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.04□□□□□ -1.44
CALR3Q96L12 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 LINC01963-201ENST00000562038 3148 ntBASIC6.04□□□□□ -1.44
CALR3Q96L12 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CALR3Q96L12 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms