Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS50Q96JG6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS50Q96JG6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS50Q96JG6 DCAF13P1-201ENST00000495256 1330 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AL122126.1-201ENST00000546905 1318 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 RNA5SP447-201ENST00000363749 119 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 RNA5SP22-201ENST00000365393 109 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 RNA5SP151-201ENST00000365632 117 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS50Q96JG6 RNU1-44P-201ENST00000384453 163 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 MIR1305-201ENST00000408300 86 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 MIR1183-201ENST00000408856 89 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC092017.2-201ENST00000427600 362 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 AL132765.1-201ENST00000434165 553 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 RPL7P36-201ENST00000444633 681 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 PDSS1P2-201ENST00000449397 678 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 RPL21P103-201ENST00000479921 488 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 BNIP3P41-201ENST00000503774 571 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 RN7SKP277-201ENST00000516895 283 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 PAICSP4-201ENST00000517543 1253 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AP001781.1-201ENST00000530977 207 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 MIR3913-1-201ENST00000577744 102 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AP001094.1-201ENST00000579805 193 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC005255.1-201ENST00000593748 216 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC020914.4-201ENST00000597690 277 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC008782.1-201ENST00000603386 430 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC103792.1-201ENST00000603591 919 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AL390208.1-201ENST00000605885 644 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC068137.3-201ENST00000639191 341 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC073869.6-201ENST00000640656 341 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 MAPK10-253ENST00000641010 4072 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 AC025031.4-201ENST00000621248 3271 ntBASIC4.31□□□□□ -1.72
VPS50Q96JG6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VPS50Q96JG6 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS50Q96JG6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS50Q96JG6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS50Q96JG6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS50Q96JG6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS50Q96JG6 SNORA70.2-201ENST00000364506 135 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 Y_RNA.598-201ENST00000410480 95 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 RN7SKP33-201ENST00000410942 340 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 JKAMPP1-201ENST00000413804 919 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 USP9YP13-201ENST00000417797 480 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AL356387.2-201ENST00000422272 243 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 GLRXP1-201ENST00000423261 334 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 MTCYBP45-201ENST00000435243 565 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AL356276.2-201ENST00000435919 558 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 HSPE1P28-201ENST00000443139 211 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC244505.5-201ENST00000443639 207 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 KLF3P2-201ENST00000465138 268 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC022034.3-201ENST00000471393 478 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC138853.1-201ENST00000503549 823 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC109464.2-201ENST00000510242 943 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 PARP4P3-201ENST00000510265 317 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC112191.3-201ENST00000604371 277 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 HMGB1P50-201ENST00000605814 607 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 MIR7703-201ENST00000620784 77 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC004009.2-201ENST00000623016 728 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 AC006065.6-201ENST00000625201 545 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 FAM157B-203ENST00000639350 358 ntBASIC4.3□□□□□ -1.72
VPS50Q96JG6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS50Q96JG6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
VPS50Q96JG6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS50Q96JG6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms