Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRCH3Q96II8 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRCH3Q96II8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRCH3Q96II8 SELENOWP1-201ENST00000322792 252 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 MIR765-201ENST00000390226 114 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 RPL35AP3-201ENST00000414680 288 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC007098.1-201ENST00000420122 367 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AL035461.1-201ENST00000421490 332 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC091180.1-201ENST00000462104 372 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 RPS23P6-201ENST00000466136 431 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 RPS27AP1-201ENST00000475545 471 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 RPS17P5-201ENST00000498293 408 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC005798.1-201ENST00000513715 387 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 IGHVII-62-1-201ENST00000519283 235 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC027667.1-201ENST00000545814 304 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC093023.1-201ENST00000547375 507 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC067852.5-201ENST00000589299 310 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AL160281.1-201ENST00000605307 311 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AC034102.8-201ENST00000615146 484 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 AL354718.1-201ENST00000619764 589 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 U1.31-201ENST00000620022 160 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LRCH3Q96II8 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRCH3Q96II8 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LRCH3Q96II8 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.57□□□□□ -1.36
LRCH3Q96II8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
LRCH3Q96II8 AP001148.1-201ENST00000624124 2359 ntBASIC6.57□□□□□ -1.36
LRCH3Q96II8 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LRCH3Q96II8 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LRCH3Q96II8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
LRCH3Q96II8 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LRCH3Q96II8 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
LRCH3Q96II8 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LRCH3Q96II8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 Y_RNA.27-201ENST00000362540 103 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 Y_RNA.439-201ENST00000384119 94 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 RN7SKP159-201ENST00000410657 292 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 AL030996.1-201ENST00000411430 235 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 CYP4F30P-202ENST00000420048 405 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 AL356981.1-201ENST00000454879 684 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 RN7SL222P-201ENST00000476452 299 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 RN7SL57P-201ENST00000493687 290 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 RN7SL544P-201ENST00000617232 284 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 RN7SL763P-201ENST00000620922 284 ntBASIC6.56□□□□□ -1.36
LRCH3Q96II8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LRCH3Q96II8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LRCH3Q96II8 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.56□□□□□ -1.36
LRCH3Q96II8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 LCOR-201ENST00000286067 4542 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 AC011504.1-201ENST00000623331 4103 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
LRCH3Q96II8 WBP11P1-201ENST00000562560 1931 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 Y_RNA.233-201ENST00000364407 101 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 RNU6-1303P-201ENST00000364841 107 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 Y_RNA.353-201ENST00000365440 108 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 Y_RNA.533-201ENST00000384596 114 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 CYB5AP4-201ENST00000396692 399 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 AC009804.1-201ENST00000400949 179 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 RNU6-1135P-201ENST00000411083 103 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.55□□□□□ -1.36
LRCH3Q96II8 RPS26P56-201ENST00000444468 240 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 BTF3P6-201ENST00000448054 499 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 AL353691.1-201ENST00000451332 387 ntBASIC6.55□□□□□ -1.36
LRCH3Q96II8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms