Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 AC018710.1-201ENST00000506509 158 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 NDUFB4P2-201ENST00000509515 391 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 SAP18P1-201ENST00000512058 390 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 RNU6-714P-201ENST00000516963 103 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AF235103.2-201ENST00000525753 346 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 GSTP1P1-201ENST00000548078 319 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AL442663.2-201ENST00000554385 511 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC009117.1-201ENST00000563948 554 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 MIR5697-201ENST00000578045 78 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 BNIP3P8-201ENST00000597863 560 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC004853.1-201ENST00000604902 698 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC103710.1-201ENST00000610003 901 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AP001506.1-201ENST00000615444 211 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AC104010.1-201ENST00000616889 150 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 AL023881.1-201ENST00000621088 301 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 MIR1321-201ENST00000637766 79 ntBASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP3Q96DZ5 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 RNU6-853P-201ENST00000364306 107 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 FAT1P1-201ENST00000406588 507 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 RPL12P9-201ENST00000412942 488 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AL354751.2-201ENST00000415471 210 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AF186996.5-201ENST00000418098 904 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AL391219.1-201ENST00000422570 483 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC009238.2-201ENST00000431026 355 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 BX323845.1-201ENST00000432417 179 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 TCEA1P1-201ENST00000449716 880 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AL353691.1-201ENST00000451332 387 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 BTF3P5-201ENST00000457252 467 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 snoU109.1-201ENST00000459339 135 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 HMGB1P25-201ENST00000468402 607 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 ST13P14-201ENST00000474095 734 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC012170.1-201ENST00000495139 359 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC111000.3-201ENST00000508057 576 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 SNORA18.6-201ENST00000516792 115 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 Y_RNA.704-201ENST00000516851 102 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 RPS3AP23-202ENST00000574601 686 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC022916.3-201ENST00000592961 742 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AP001429.1-201ENST00000602568 530 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AP005432.2-201ENST00000608162 586 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AL139089.1-201ENST00000620372 975 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC068880.5-201ENST00000624331 290 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 AC006065.6-201ENST00000625201 545 ntBASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP3Q96DZ5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLIP3Q96DZ5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP3Q96DZ5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP3Q96DZ5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.76□□□□□ -1.65
CLIP3Q96DZ5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP3Q96DZ5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CLIP3Q96DZ5 FRG1BP-201ENST00000278882 761 ntBASIC4.76□□□□□ -1.65
CLIP3Q96DZ5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP3Q96DZ5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms