Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AP005264.7-201ENST00000625003 745 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC008013.2-202ENST00000637965 364 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 FAM91A3P-201ENST00000456826 2544 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHMP4CQ96CF2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNU1-14P-201ENST00000362759 152 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNU4-24P-201ENST00000364565 139 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNU6-343P-201ENST00000364709 104 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNU6-744P-201ENST00000365557 107 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNU6-1316P-201ENST00000384242 108 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 SNORA70C-201ENST00000384538 135 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP317-201ENST00000410176 116 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP311-201ENST00000411290 116 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 NDUFAF4P3-201ENST00000456468 525 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNU6-956P-201ENST00000458868 103 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RAP1BP2-201ENST00000478270 544 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC006517.1-201ENST00000480485 328 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 TXNP6-201ENST00000510190 310 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP315-201ENST00000516340 116 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP312-201ENST00000517068 116 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC025881.1-201ENST00000518851 512 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AP003730.1-201ENST00000524605 285 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AP000873.5-201ENST00000533906 236 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC063950.1-201ENST00000552036 308 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC107954.1-201ENST00000565906 727 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC091489.2-201ENST00000566263 604 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 RN7SL600P-201ENST00000581811 299 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 ABBA01006766.1-201ENST00000584728 294 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 RSL24D1P11-201ENST00000591045 491 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 FAM27D1-201ENST00000612308 341 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 HULC.1-201ENST00000612720 240 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC090582.1-201ENST00000636321 199 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHMP4CQ96CF2 AC026951.1-201ENST00000559530 2459 ntBASIC5□□□□□ -1.61
CHMP4CQ96CF2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5□□□□□ -1.61
CHMP4CQ96CF2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC006378.2-201ENST00000623178 2476 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 Y_RNA.126-201ENST00000363382 111 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 RN7SKP227-201ENST00000364445 330 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 U3.29-201ENST00000391296 212 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC007742.1-201ENST00000425789 329 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 ELOCP18-201ENST00000434209 337 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 ELOCP26-201ENST00000436067 329 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 snoU13.8-201ENST00000458890 104 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 RPS4XP10-201ENST00000465034 731 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 RPL23AP2-201ENST00000471227 466 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AP000797.1-201ENST00000478870 387 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 HMGB1P36-201ENST00000487709 576 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 RPL35P6-201ENST00000490024 372 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC091435.1-201ENST00000505442 584 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 TMEM248P1-201ENST00000510579 951 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 OR6C73P-201ENST00000546432 358 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms