Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 OR6C7P-201ENST00000547875 934 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AC084824.1-201ENST00000550917 1005 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AGGF1P5-201ENST00000567900 919 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AC022146.1-201ENST00000595307 847 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 BBIP1P1-201ENST00000602999 279 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AL390240.1-201ENST00000612950 384 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AP000484.1-201ENST00000620067 1252 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 MIR6730-201ENST00000622213 67 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 FAM133CP-201ENST00000332869 704 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 Y_RNA.234-201ENST00000364409 97 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 RNU6-343P-201ENST00000364709 104 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 RNU6-83P-201ENST00000384568 112 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 RNU4-6P-201ENST00000410804 122 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC016397.1-201ENST00000412463 242 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 CCDC58P2-201ENST00000417131 366 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC006960.1-201ENST00000419980 153 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC009480.2-201ENST00000422916 432 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC073143.1-201ENST00000436316 395 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 MTND5P14-201ENST00000441481 1267 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC002381.1-201ENST00000447049 280 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 Z73417.1-201ENST00000447373 778 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 NANOGP10-201ENST00000453325 895 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 MEMO1P3-201ENST00000459811 302 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC104563.1-201ENST00000476147 376 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC105185.1-201ENST00000518705 535 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC103783.1-201ENST00000520506 373 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 MED28P6-201ENST00000558776 231 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AL137849.1-201ENST00000604767 169 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AL158042.1-201ENST00000605338 460 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AC106028.5-201ENST00000610332 395 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 AL592295.2-201ENST00000612578 206 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 OR6C71P-202ENST00000641886 1107 ntBASIC3.66□□□□□ -1.82
VPS33AQ96AX1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS33AQ96AX1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS33AQ96AX1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS33AQ96AX1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS33AQ96AX1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AL161781.1-201ENST00000354277 403 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RNA5SP130-201ENST00000364431 114 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RNU6-359P-201ENST00000365466 108 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RNU2-43P-201ENST00000410306 190 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 YPEL5P1-201ENST00000419731 367 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AL691449.1-201ENST00000426570 421 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RSL24D1P3-201ENST00000449255 495 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RPL7P23-201ENST00000493874 747 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RAC1P2-201ENST00000511164 579 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms