Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC4Q92889 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AC016831.4-201ENST00000438302 307 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 RPL17P49-201ENST00000443728 411 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.05□□□□□ -1.6
ERCC4Q92889 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC4Q92889 AC091685.2-201ENST00000454924 864 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AC087312.1-201ENST00000471411 480 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 RPS3AP14-201ENST00000483907 780 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 FAM172BP-201ENST00000487497 1089 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 RPL30P11-201ENST00000495304 339 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC4Q92889 AC114967.1-201ENST00000504890 259 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AC006390.1-201ENST00000508068 283 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC4Q92889 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC4Q92889 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.05□□□□□ -1.6
ERCC4Q92889 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC4Q92889 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC4Q92889 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.05□□□□□ -1.6
ERCC4Q92889 CKS1BP3-201ENST00000600888 237 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AL512782.1-201ENST00000603093 364 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AP000907.4-201ENST00000604143 237 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AC020634.1-201ENST00000608701 549 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AC017083.3-201ENST00000609955 700 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AL590282.1-201ENST00000610379 1136 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 AL359314.1-201ENST00000616913 261 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.05□□□□□ -1.6
ERCC4Q92889 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC4Q92889 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.05□□□□□ -1.6
ERCC4Q92889 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC4Q92889 AC016588.2-201ENST00000632484 3021 ntBASIC5.05□□□□□ -1.6
ERCC4Q92889 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC4Q92889 SDAD1P1-202ENST00000524156 2051 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC108467.2-201ENST00000617640 1597 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC4Q92889 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ERCC4Q92889 RNA5SP513-201ENST00000364648 118 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 Y_RNA.402-201ENST00000383972 102 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 Y_RNA.453-201ENST00000384223 109 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 RNU1-44P-201ENST00000384453 163 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 MIR585-201ENST00000384887 94 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 RNU6-780P-201ENST00000391030 104 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 RNU4-55P-201ENST00000410731 137 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC138393.2-201ENST00000414742 246 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC4Q92889 SPA17P1-201ENST00000416656 452 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 RWDD4P2-201ENST00000426392 563 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 ZNF863P-201ENST00000426746 417 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 RPS12P10-201ENST00000427031 377 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AL360081.1-201ENST00000428299 555 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 RPS6P12-201ENST00000432491 726 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ERCC4Q92889 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC4Q92889 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC4Q92889 NDUFS5P3-201ENST00000450668 321 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.04□□□□□ -1.6
ERCC4Q92889 RPL12P20-201ENST00000475538 479 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.04□□□□□ -1.6
ERCC4Q92889 MTND1P3-201ENST00000484956 952 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC069439.1-201ENST00000494739 167 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC025445.1-201ENST00000502728 300 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC4Q92889 RNU6-201P-201ENST00000517100 61 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC4Q92889 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
ERCC4Q92889 AC090151.1-201ENST00000520784 730 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC4Q92889 FAM92A1P1-201ENST00000528023 890 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC4Q92889 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC4Q92889 AL157687.1-201ENST00000554853 619 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC034268.2-201ENST00000571784 482 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 MIR4700-201ENST00000578311 74 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ERCC4Q92889 MIR4512-201ENST00000583257 77 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.04□□□□□ -1.6
ERCC4Q92889 MIR4719-201ENST00000585233 84 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AL353997.4-201ENST00000586196 166 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.04□□□□□ -1.6
ERCC4Q92889 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC4Q92889 AC008277.2-201ENST00000605196 797 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC4Q92889 AC006065.6-201ENST00000625201 545 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 AC110994.2-201ENST00000635481 492 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC4Q92889 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC4Q92889 SAGE4P-201ENST00000442271 3381 ntBASIC5.04□□□□□ -1.6
ERCC4Q92889 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ERCC4Q92889 AC130650.2-201ENST00000618736 2403 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.03□□□□□ -1.6
ERCC4Q92889 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC4Q92889 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 Y_RNA.46-201ENST00000362695 102 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 RNY4P34-201ENST00000364779 95 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.03□□□□□ -1.6
ERCC4Q92889 AL031679.1-201ENST00000400616 525 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 AL024474.1-201ENST00000404655 591 ntBASIC5.03□□□□□ -1.6
ERCC4Q92889 RNA5SP104-201ENST00000410989 118 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms