Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNA5SP312-201ENST00000517068 116 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AC104986.1-201ENST00000517978 436 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AC008489.1-201ENST00000524271 483 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 MIR3160-1-201ENST00000577972 85 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 LLPHP1-201ENST00000603571 367 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AL591034.3-201ENST00000605511 685 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 RNU6-88P-201ENST00000606801 100 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AC064807.4-201ENST00000607201 407 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AL159169.3-201ENST00000608871 561 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AC079684.1-201ENST00000621405 437 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 AC231657.1-201ENST00000624313 397 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 U6.101-201ENST00000637707 76 ntBASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A1Q8WWI5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 CEP170P1-201ENST00000502249 4587 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AL513185.3-201ENST00000433335 1300 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 RPL21P132-201ENST00000331267 462 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 RNU6-462P-201ENST00000362659 105 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 RNA5SP130-201ENST00000364431 114 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 Y_RNA.302-201ENST00000364997 102 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 EIF5P1-201ENST00000400019 1231 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC009237.5-201ENST00000414271 501 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 Z97055.1-201ENST00000419730 712 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AL691449.1-201ENST00000426570 421 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 RPL23AP74-201ENST00000437246 471 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 MTCYBP39-201ENST00000437562 491 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 ARPC3P5-201ENST00000448802 534 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 RPS27AP8-201ENST00000452665 445 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 RPS7P7-201ENST00000463499 571 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC092470.1-201ENST00000546187 132 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC084824.1-201ENST00000550917 1005 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC136618.2-201ENST00000575091 400 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 LARP7P2-201ENST00000575306 125 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 MIR3915-201ENST00000578518 97 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AL020997.2-201ENST00000602607 184 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AL034351.1-201ENST00000605288 668 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC103710.3-201ENST00000608157 948 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC105429.2-201ENST00000610567 517 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC012531.5-201ENST00000611375 151 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC079228.1-201ENST00000624774 1049 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 AC127502.3-201ENST00000636170 1206 ntBASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC44A1Q8WWI5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 GDI2P1-201ENST00000429312 1336 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 Y_RNA.126-201ENST00000363382 111 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 SNORD116-9-201ENST00000384000 95 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 SNORD116-3-201ENST00000384287 95 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 SNORD116-7-201ENST00000384404 95 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 SNORD116-5-201ENST00000384462 95 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC016769.3-201ENST00000396562 315 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AL022722.2-201ENST00000402519 180 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 Z99497.1-201ENST00000421282 135 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 RPS29P31-201ENST00000446147 164 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms