Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC010468.3-201ENST00000508225 458 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 AC119751.1-201ENST00000513357 765 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 PRELID3BP4-201ENST00000515476 571 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.37□□□□□ -1.87
RNF139Q8WU17 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF139Q8WU17 AC006518.1-201ENST00000541449 943 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF139Q8WU17 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF139Q8WU17 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.37□□□□□ -1.87
RNF139Q8WU17 RPL21P12-201ENST00000559810 515 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 COX6CP3-201ENST00000580869 223 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF139Q8WU17 AL450489.1-201ENST00000612071 468 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 AC008121.2-201ENST00000614647 523 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 AP003122.6-201ENST00000623831 495 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.37□□□□□ -1.87
RNF139Q8WU17 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF139Q8WU17 AL136520.1-201ENST00000600311 1322 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 AL049780.3-201ENST00000624612 1583 ntBASIC3.37□□□□□ -1.87
RNF139Q8WU17 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF139Q8WU17 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 CYCSP45-201ENST00000402289 315 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 RNA5SP107-201ENST00000411358 122 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 USP9YP36-201ENST00000424581 829 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 BX890604.2-201ENST00000427883 474 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 UBE2V1P6-201ENST00000430840 422 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC005002.1-201ENST00000447458 540 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 RPL23AP31-201ENST00000456160 467 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 TPRKBP1-201ENST00000456243 481 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC091179.1-201ENST00000461606 579 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC068724.1-201ENST00000487100 792 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC026427.2-201ENST00000506228 536 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC111000.2-201ENST00000507775 550 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 AP001804.3-201ENST00000525146 880 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 SNRPGP16-201ENST00000533275 226 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 OSBPL9P3-201ENST00000534523 595 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC055876.5-201ENST00000605667 259 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 AL442067.2-201ENST00000614033 363 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 AC073476.4-201ENST00000628409 72 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 MIR3651-201ENST00000630427 90 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 CUL1P1-201ENST00000509510 2425 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.36□□□□□ -1.87
RNF139Q8WU17 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF139Q8WU17 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF139Q8WU17 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF139Q8WU17 SRP72P2-201ENST00000344851 1979 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
RNF139Q8WU17 FAM35CP-201ENST00000554755 2470 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF139Q8WU17 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF139Q8WU17 OR1S2-201ENST00000302592 978 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 RPS7P13-201ENST00000413955 498 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 AL035410.1-201ENST00000427409 427 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 RSL24D1P8-201ENST00000434442 492 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC127537.2-201ENST00000439258 465 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 TXNP1-201ENST00000441872 371 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC115115.1-201ENST00000449927 248 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 snoU109.4-201ENST00000458953 143 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 RN7SL863P-201ENST00000462370 296 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 RPS4XP6-201ENST00000477670 797 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 RN7SL504P-201ENST00000494496 287 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC108078.3-201ENST00000502633 489 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC005951.1-201ENST00000576706 485 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC107308.1-201ENST00000615897 301 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 MIR6076-201ENST00000617521 113 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC022509.4-201ENST00000621404 572 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC090897.3-201ENST00000636973 1157 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RNF139Q8WU17 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF139Q8WU17 MTND4P21-201ENST00000453886 1357 ntBASIC3.35□□□□□ -1.87
RNF139Q8WU17 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF139Q8WU17 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RNF139Q8WU17 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF139Q8WU17 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF139Q8WU17 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF139Q8WU17 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms