Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTL9Q8NET4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.07□□□□□ -1.92
RTL9Q8NET4 TRIM60P18-201ENST00000441518 828 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 HMGN2P21-201ENST00000447764 270 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 RPL36AP33-201ENST00000450395 310 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 AC008280.2-201ENST00000455473 307 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 HMGB1P25-201ENST00000468402 607 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 HMGB3P15-201ENST00000507326 574 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 AC234781.5-201ENST00000508429 271 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 IGKV3-31-201ENST00000523109 329 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.07□□□□□ -1.92
RTL9Q8NET4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.07□□□□□ -1.92
RTL9Q8NET4 AC079228.1-201ENST00000624774 1049 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 AC084035.1-201ENST00000634543 607 ntBASIC3.07□□□□□ -1.92
RTL9Q8NET4 AC009501.3-201ENST00000605001 1352 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTL9Q8NET4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 SNORD21-201ENST00000383953 95 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 SAR1AP2-201ENST00000392696 594 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 ZYG11AP1-201ENST00000430329 837 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 CACYBPP1-201ENST00000438592 684 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 RNA5SP76-201ENST00000516277 87 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 AC092184.1-201ENST00000625042 715 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 LRRC77P-213ENST00000637727 880 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.06□□□□□ -1.92
RTL9Q8NET4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTL9Q8NET4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.06□□□□□ -1.92
RTL9Q8NET4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTL9Q8NET4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTL9Q8NET4 RNA5SP189-201ENST00000364920 115 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 YWHAZP7-201ENST00000436906 631 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 FAM103A2P-201ENST00000444122 354 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 HIGD1AP2-201ENST00000446367 280 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 ST13P20-201ENST00000447996 1065 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL9Q8NET4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.05□□□□□ -1.92
RTL9Q8NET4 RN7SL636P-201ENST00000497504 294 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.05□□□□□ -1.92
RTL9Q8NET4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.05□□□□□ -1.92
RTL9Q8NET4 MIR4648-201ENST00000580107 72 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 AC023043.3-201ENST00000593113 385 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 AC007938.3-201ENST00000604965 623 ntBASIC3.05□□□□□ -1.92
RTL9Q8NET4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RTL9Q8NET4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTL9Q8NET4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RTL9Q8NET4 AL161431.1-201ENST00000618966 4205 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 MIR1289-2-201ENST00000408360 111 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 RNA5SP425-201ENST00000410336 112 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 AL513175.2-201ENST00000422071 443 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 NANOGP5-201ENST00000424456 877 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 MUPP-201ENST00000438111 566 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 COX6CP2-201ENST00000444980 225 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 RPS15AP1-201ENST00000457423 391 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 AC078899.3-201ENST00000599065 212 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 MIR1291-201ENST00000627649 87 ntBASIC3.04□□□□□ -1.92
RTL9Q8NET4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTL9Q8NET4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.04□□□□□ -1.92
RTL9Q8NET4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RTL9Q8NET4 RNU4-7P-201ENST00000364758 141 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 MIR92A2-201ENST00000385299 75 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 RNA5SP210-201ENST00000391034 120 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 RPS3AP26-201ENST00000398259 784 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 RPL31P45-201ENST00000419532 356 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 HMGB3P12-201ENST00000438745 556 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 RPL21P2-201ENST00000440049 481 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 RPL23AP45-201ENST00000476406 468 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 AC008837.1-201ENST00000511513 412 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 AL442163.2-201ENST00000553912 710 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 RPL23AP84-201ENST00000571193 464 ntBASIC3.03□□□□□ -1.92
RTL9Q8NET4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.03□□□□□ -1.92
RTL9Q8NET4 SNORA35B-201ENST00000607417 129 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms