Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MIR525-201ENST00000384978 85 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AL356057.1-202ENST00000402263 756 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 RNA5SP56-201ENST00000410277 118 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 HSFY1P1-201ENST00000423928 1178 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC096632.1-201ENST00000427395 310 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC010881.1-201ENST00000433830 235 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 CYCSP32-201ENST00000440548 321 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 SSXP4-201ENST00000451349 245 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 HMGB1P15-201ENST00000453854 435 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 RPS15AP1-201ENST00000457423 391 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 RPL21P41-201ENST00000459863 264 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC025181.1-201ENST00000477507 416 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC011825.1-201ENST00000484967 388 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC010374.2-201ENST00000512933 535 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 RNU1-61P-201ENST00000516107 151 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 SNORA31.20-201ENST00000517111 133 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 GTF2IP8-201ENST00000560687 584 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC022069.1-201ENST00000582910 658 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AL669831.4-202ENST00000590817 238 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 VN1R88P-201ENST00000596787 292 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC103881.1-201ENST00000603476 538 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 DPRXP5-201ENST00000604662 539 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 CYCSP41-201ENST00000616920 296 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC073569.3-201ENST00000619055 682 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC073055.1-201ENST00000456901 1621 ntBASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.6□□□□□ -1.99
ZIC4Q8N9L1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 RNU6-263P-201ENST00000363811 107 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AL031121.1-201ENST00000406553 254 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 MTCO3P12-201ENST00000416718 547 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 DUTP6-201ENST00000425573 462 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC073508.1-201ENST00000428866 656 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC114973.1-201ENST00000429057 632 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC112492.1-201ENST00000449607 712 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 RPS29P26-201ENST00000477483 171 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 RPS29P2-201ENST00000479278 136 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 RPS27P23-201ENST00000487608 251 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 RPL7P23-201ENST00000493874 747 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC007536.1-201ENST00000533382 349 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC034105.3-201ENST00000565294 442 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AL355812.1-201ENST00000603215 216 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AL513477.2-201ENST00000607858 568 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC013468.1-201ENST00000608680 598 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AL390240.1-201ENST00000612950 384 ntBASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.59□□□□□ -1.99
ZIC4Q8N9L1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.59□□□□□ -2
ZIC4Q8N9L1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZIC4Q8N9L1 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
ZIC4Q8N9L1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 RNU1-140P-201ENST00000365040 165 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 RNU4-78P-201ENST00000410940 126 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 RPL23AP83-201ENST00000434984 473 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC140076.1-201ENST00000449897 361 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 HMGN3P1-201ENST00000453847 193 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.58□□□□□ -2
ZIC4Q8N9L1 SNORA74D-201ENST00000516404 141 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 SNORA48.9-201ENST00000516419 162 ntBASIC2.58□□□□□ -2
ZIC4Q8N9L1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms