Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MLLT10P2-201ENST00000506434 249 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 RNU1-61P-201ENST00000516107 151 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC010738.1-201ENST00000604970 987 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC245389.1-201ENST00000605141 529 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 U4.6-201ENST00000621618 127 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AL360181.4-201ENST00000621752 134 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC138915.3-201ENST00000562908 1389 ntBASIC3.63□□□□□ -1.83
RTL3Q8N8U3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 MFSD8-233ENST00000641482 4860 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 FRG1CP-201ENST00000358464 769 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SNORD65.1-201ENST00000390889 71 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 MTCO1P56-201ENST00000401674 224 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 RNU4-65P-201ENST00000410473 140 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AL159169.1-201ENST00000421119 127 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 C1DP1-201ENST00000426049 402 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 GTF2IP3-201ENST00000433887 494 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SETP5-201ENST00000437270 562 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 PNPLA4P1-201ENST00000458328 305 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC091564.1-201ENST00000464563 479 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC069528.1-202ENST00000482888 637 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 RPL21P131-201ENST00000497298 483 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 RPL7P47-201ENST00000497299 556 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC021146.1-201ENST00000511202 716 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC010625.1-201ENST00000511296 403 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC026412.2-201ENST00000512270 1075 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 OR10V3P-201ENST00000525712 725 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC103843.2-201ENST00000530523 682 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AP000619.3-201ENST00000535634 1127 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AL450336.1-201ENST00000605180 586 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AL034351.1-201ENST00000605288 668 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SNORA51-201ENST00000606420 132 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 VIS1.1-201ENST00000610517 203 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.62□□□□□ -1.83
RTL3Q8N8U3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RTL3Q8N8U3 AC068647.1-201ENST00000489539 2265 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 Y_RNA.25-201ENST00000362528 102 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 RNU4-51P-201ENST00000364206 140 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 RNU6-224P-201ENST00000384055 107 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 MIR200C-201ENST00000384980 68 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 ARF4P3-201ENST00000397387 509 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 RNU2-15P-201ENST00000410692 191 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms