Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
XRN1Q8IZH2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
XRN1Q8IZH2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
XRN1Q8IZH2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
XRN1Q8IZH2 EXOC5P1-201ENST00000510543 1969 ntBASIC3.14□□□□□ -1.91
XRN1Q8IZH2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
XRN1Q8IZH2 SNORA17.3-201ENST00000391159 129 ntBASIC3.14□□□□□ -1.91
XRN1Q8IZH2 CACYBPP1-201ENST00000438592 684 ntBASIC3.14□□□□□ -1.91
XRN1Q8IZH2 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.14□□□□□ -1.91
XRN1Q8IZH2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.14□□□□□ -1.91
XRN1Q8IZH2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.14□□□□□ -1.91
XRN1Q8IZH2 HSPE1P18-201ENST00000517602 280 ntBASIC3.14□□□□□ -1.91
XRN1Q8IZH2 AC090819.1-201ENST00000523800 1111 ntBASIC3.14□□□□□ -1.91
XRN1Q8IZH2 AK6P1-201ENST00000540219 478 ntBASIC3.14□□□□□ -1.91
XRN1Q8IZH2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.14□□□□□ -1.91
XRN1Q8IZH2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.14□□□□□ -1.91
XRN1Q8IZH2 AL356292.1-201ENST00000283110 373 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 RNU6-1159P-201ENST00000362933 107 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 SNORA62.2-201ENST00000364672 152 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 ISCA1P6-201ENST00000427740 390 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 AC006254.3-201ENST00000603353 884 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 AC002076.2-201ENST00000617362 122 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 AL136964.1-201ENST00000622038 2990 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 FRG1BP-201ENST00000278882 761 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 RPS15AP28-201ENST00000435088 386 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 SCARNA16.3-201ENST00000516595 184 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 AC012182.1-201ENST00000570133 895 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 AC017076.1-201ENST00000607613 578 ntBASIC3.13□□□□□ -1.91
XRN1Q8IZH2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.13□□□□□ -1.91
XRN1Q8IZH2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 AL592045.1-201ENST00000429867 352 ntBASIC3.12□□□□□ -1.91
XRN1Q8IZH2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 OR4H12P-201ENST00000556269 907 ntBASIC3.12□□□□□ -1.91
XRN1Q8IZH2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 AP001004.1-201ENST00000582468 324 ntBASIC3.12□□□□□ -1.91
XRN1Q8IZH2 TPMTP1-201ENST00000592307 737 ntBASIC3.12□□□□□ -1.91
XRN1Q8IZH2 AP004247.3-201ENST00000608682 624 ntBASIC3.12□□□□□ -1.91
XRN1Q8IZH2 AC009831.4-201ENST00000620744 325 ntBASIC3.12□□□□□ -1.91
XRN1Q8IZH2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
XRN1Q8IZH2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
XRN1Q8IZH2 SNORD21-201ENST00000383953 95 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 MIR221-201ENST00000385135 110 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.11□□□□□ -1.91
XRN1Q8IZH2 RPL23AP42-201ENST00000471152 471 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.11□□□□□ -1.91
XRN1Q8IZH2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.11□□□□□ -1.91
XRN1Q8IZH2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.11□□□□□ -1.91
XRN1Q8IZH2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.11□□□□□ -1.91
XRN1Q8IZH2 AC010378.1-201ENST00000619270 362 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 AL160394.1-201ENST00000624765 724 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 AC009501.3-201ENST00000605001 1352 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 ADAM3A-203ENST00000461344 2157 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
XRN1Q8IZH2 MTND5P28-201ENST00000438005 1594 ntBASIC3.11□□□□□ -1.91
XRN1Q8IZH2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AL353997.5-201ENST00000618886 171 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AL356266.1-201ENST00000623311 483 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 MIR219B-201ENST00000637023 88 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 MTND5P29-201ENST00000458676 1807 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AC025125.1-201ENST00000624743 1922 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 Y_RNA.238-201ENST00000364441 102 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 SNORD6-201ENST00000365444 73 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 RPS24P8-201ENST00000431490 402 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 RNA5SP200-201ENST00000516360 103 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AP003467.2-201ENST00000520175 319 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 OR11H5P-201ENST00000554039 926 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AC105137.2-201ENST00000569073 466 ntBASIC3.1□□□□□ -1.91
XRN1Q8IZH2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
XRN1Q8IZH2 AC008432.1-201ENST00000615912 1320 ntBASIC3.09□□□□□ -1.91
XRN1Q8IZH2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
XRN1Q8IZH2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms