Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC090686.1-201ENST00000481577 749 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC091912.1-201ENST00000511351 248 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 RNU6-277P-201ENST00000516272 106 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 RNU4-60P-201ENST00000517239 135 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AP005597.4-201ENST00000526762 229 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC010525.2-201ENST00000590920 195 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC040896.1-201ENST00000613819 479 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 TUG1_2.1-201ENST00000614234 87 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC100810.6-201ENST00000638068 285 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 AC015799.1-201ENST00000622996 3122 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 MTND4P27-201ENST00000450813 1354 ntBASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NPAS4Q8IUM7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RPL7P26-201ENST00000333817 754 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 Y_RNA.166-201ENST00000363730 102 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RNU5E-6P-201ENST00000365574 115 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 Y_RNA.431-201ENST00000384086 102 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RNU2-36P-201ENST00000410361 191 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RNU2-29P-201ENST00000410423 189 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RNU6-193P-201ENST00000410977 107 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RAB28P1-201ENST00000411517 641 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 OR6C66P-201ENST00000414917 930 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RPS7P15-201ENST00000415804 584 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 OR2AM1P-201ENST00000422137 422 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AL365400.1-201ENST00000431854 640 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RPL36AP53-201ENST00000432891 316 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 MTATP6P16-201ENST00000434543 526 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RPS29P10-201ENST00000439197 166 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 MTCO3P45-201ENST00000443036 613 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 MRPL50P4-201ENST00000446432 475 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 KNOP1P3-201ENST00000446933 426 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AC079804.1-201ENST00000461922 436 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 RNU6-1092P-201ENST00000516955 87 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AC008033.2-201ENST00000542626 177 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AC020661.2-201ENST00000560114 134 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 MIR4330-201ENST00000579077 105 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 MIR4691-201ENST00000583764 85 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AC007687.1-201ENST00000602704 304 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 MTND4P14-201ENST00000435799 1354 ntBASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPAS4Q8IUM7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AL359955.1-201ENST00000455242 3275 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AC004076.2-201ENST00000620532 3323 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 RN7SKP95-201ENST00000362860 303 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 RNU6-254P-201ENST00000363377 107 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 AL359643.1-201ENST00000404109 423 ntBASIC5.65□□□□□ -1.5
NPAS4Q8IUM7 RNU2-43P-201ENST00000410306 190 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms