Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL110115.1-201ENST00000614396 364 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC095031.1-201ENST00000623685 672 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 BDP1P-201ENST00000582658 1990 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 MAPK10-253ENST00000641010 4072 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 MTND5P24-201ENST00000438892 1767 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 IPO8P1-201ENST00000455509 3109 ntBASIC3.68□□□□□ -1.82
NUP54Q7Z3B4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 MIR372-201ENST00000362225 67 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 RNU4-6P-201ENST00000410804 122 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 RPL7AP73-201ENST00000413490 353 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC092447.3-201ENST00000426027 686 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC096638.2-201ENST00000434965 711 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 SNRPEP4-201ENST00000435815 279 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AL008629.1-201ENST00000438615 184 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 RPS11P1-201ENST00000451072 473 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 MTCO3P11-201ENST00000455103 774 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 U3.44-201ENST00000458938 192 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC017015.1-201ENST00000477387 286 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC006390.1-201ENST00000508068 283 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 DEFB131D-201ENST00000526803 184 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AP003461.1-201ENST00000528866 78 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 MIR3160-1-201ENST00000577972 85 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AL031281.1-201ENST00000604049 488 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC080013.4-201ENST00000607624 649 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC068831.8-201ENST00000620171 435 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC231657.1-201ENST00000624313 397 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC007490.1-201ENST00000624321 703 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC104454.1-201ENST00000421341 1401 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AP002907.1-201ENST00000606361 1430 ntBASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP54Q7Z3B4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 AL021368.2-201ENST00000606125 5352 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 RNU6-931P-201ENST00000363850 107 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 RNU6-173P-201ENST00000364215 104 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 RNA5SP283-201ENST00000365604 119 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 SNORD51-201ENST00000384320 80 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 RNU6-878P-201ENST00000384578 110 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 ATP5F1P4-201ENST00000397288 746 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 RNA5SP39-201ENST00000411245 120 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 USP9YP33-201ENST00000412220 421 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 MTCYBP38-201ENST00000417160 1123 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 AC092647.1-201ENST00000420654 287 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 OR8F1P-201ENST00000425243 930 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 MTND4LP10-201ENST00000435146 291 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 USP9YP35-201ENST00000435696 412 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 YWHAZP7-201ENST00000436906 631 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 AC083863.1-201ENST00000438811 231 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 HMGB3P22-202ENST00000451823 572 ntBASIC3.66□□□□□ -1.82
NUP54Q7Z3B4 USP9YP10-201ENST00000454868 628 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms