Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC105429.2-201ENST00000610567 517 ntBASIC3.76□□□□□ -1.81
SHFQ7M4L6 AC005332.10-201ENST00000612725 619 ntBASIC3.76□□□□□ -1.81
SHFQ7M4L6 AL445363.3-201ENST00000623080 671 ntBASIC3.76□□□□□ -1.81
SHFQ7M4L6 MIR6715B-201ENST00000637172 77 ntBASIC3.76□□□□□ -1.81
SHFQ7M4L6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHFQ7M4L6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.76□□□□□ -1.81
SHFQ7M4L6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHFQ7M4L6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHFQ7M4L6 MARK2P15-201ENST00000432204 2186 ntBASIC3.76□□□□□ -1.81
SHFQ7M4L6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHFQ7M4L6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SHFQ7M4L6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.76□□□□□ -1.81
SHFQ7M4L6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
SHFQ7M4L6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.76□□□□□ -1.81
SHFQ7M4L6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 CCT4P2-201ENST00000233836 1548 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 DCAF13P1-201ENST00000495256 1330 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AP002001.2-201ENST00000529025 1469 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL161781.1-201ENST00000354277 403 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 RNU6-533P-201ENST00000384144 107 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 MIR153-1-201ENST00000384914 90 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 Y_RNA.599-201ENST00000410489 109 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 RNU2-15P-201ENST00000410692 191 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 Z97055.1-201ENST00000419730 712 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 EZH2P1-201ENST00000431167 291 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AF228730.2-201ENST00000438784 848 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 PHBP16-201ENST00000446318 950 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC073264.2-201ENST00000448886 166 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 USP9YP12-201ENST00000450481 570 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL590365.1-201ENST00000450788 243 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 FABP3P2-201ENST00000453169 399 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 HMGB1P15-201ENST00000453854 435 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 SNORD42A-201ENST00000459584 64 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC011825.1-201ENST00000484967 388 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC093267.1-201ENST00000489176 961 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AP001025.2-201ENST00000490908 477 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 TXNP6-201ENST00000510190 310 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 RNU6-405P-201ENST00000516637 110 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 PAICSP4-201ENST00000517543 1253 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 MTCYBP20-201ENST00000524239 1129 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 OR8L1P-201ENST00000534005 955 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC080078.2-201ENST00000603766 501 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 SEPT7P9-203ENST00000604116 343 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC010680.4-201ENST00000605334 543 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC091965.4-201ENST00000607691 587 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 Z99129.1-201ENST00000612510 255 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL596245.1-201ENST00000618994 362 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 AL355480.1-201ENST00000629041 99 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.75□□□□□ -1.81
SHFQ7M4L6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHFQ7M4L6 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.75□□□□□ -1.81
SHFQ7M4L6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHFQ7M4L6 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 MTND5P29-201ENST00000458676 1807 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHFQ7M4L6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms