Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 FRG1BP-201ENST00000278882 761 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 SNORA41-201ENST00000384675 132 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 RNA5SP270-201ENST00000411361 118 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 TRIM60P18-201ENST00000441518 828 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 AC023043.2-201ENST00000589678 1026 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 WISP1-OT1-201ENST00000602893 642 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 RNU1-17P-201ENST00000363022 152 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 MIR142-201ENST00000384835 87 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 RNA5SP129-201ENST00000410276 118 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 CACYBPP1-201ENST00000438592 684 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 RPS3AP4-201ENST00000555161 764 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 Z99129.2-201ENST00000619967 314 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 AL450338.1-201ENST00000407987 512 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 AC004866.2-201ENST00000438285 481 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 AC004263.1-201ENST00000479327 332 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 VN1R79P-201ENST00000593540 513 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 AC103710.1-201ENST00000610003 901 ntBASIC1.53□□□□□ -2.16
VPS13DQ5THJ4 CDC27P2-201ENST00000425026 1922 ntBASIC1.53□□□□□ -2.17
VPS13DQ5THJ4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
VPS13DQ5THJ4 Z82209.1-201ENST00000422141 2135 ntBASIC1.53□□□□□ -2.17
VPS13DQ5THJ4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.53□□□□□ -2.17
VPS13DQ5THJ4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
VPS13DQ5THJ4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 SNORA26.9-201ENST00000391322 122 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AL357520.1-201ENST00000441557 453 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 FABP5P13-201ENST00000452144 328 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 RN7SKP82-201ENST00000516786 223 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AC055876.1-202ENST00000567053 138 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 NRBF2P1-201ENST00000587407 859 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 XPOTP1-201ENST00000443317 2398 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AL158825.1-201ENST00000414735 521 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AL035551.1-201ENST00000446931 348 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AL359821.1-201ENST00000605519 182 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AP003117.2-201ENST00000606010 545 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AL359893.1-201ENST00000447628 1580 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 SNORA25.9-201ENST00000365087 128 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 RPL36AP6-201ENST00000435770 321 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AC124916.1-201ENST00000444020 547 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 EIF5P1-201ENST00000400019 1231 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 MIR1276-201ENST00000408707 83 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 MORF4L1P6-201ENST00000418771 268 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 GAPDHP27-201ENST00000447427 1020 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 LINC00888-204ENST00000487386 421 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 XKRY-201ENST00000510392 1100 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 MIR5002-201ENST00000584713 97 ntBASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13DQ5THJ4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 BX005019.1-201ENST00000561881 1810 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AL034379.1-201ENST00000423216 253 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 AP003499.2-201ENST00000624100 483 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 RNA5SP210-201ENST00000391034 120 ntBASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS13DQ5THJ4 RPS6P12-201ENST00000432491 726 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms