Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SNORD39.4-201ENST00000620099 78 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 MIR4727-201ENST00000622232 55 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC006378.2-201ENST00000623178 2476 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AL023284.1-201ENST00000403956 276 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 RN7SKP58-201ENST00000411010 305 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 PTP4A1P7-201ENST00000423476 514 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 MIR151B-201ENST00000584249 96 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC103710.2-201ENST00000609912 942 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 RNY4P3-201ENST00000365254 95 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AMD1P2-201ENST00000412936 992 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC004965.1-201ENST00000413033 213 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 RPS29P1-201ENST00000465274 159 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 RNA5SP282-201ENST00000516355 108 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC136443.5-201ENST00000603741 370 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC007621.1-201ENST00000604544 437 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 MIR6873-201ENST00000622788 63 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 RAD23BP2-201ENST00000416003 1207 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC018630.2-202ENST00000422992 927 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC021205.2-201ENST00000480069 347 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 U4.3-201ENST00000621047 82 ntBASIC1.44□□□□□ -2.18
UBR4Q5T4S7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR4Q5T4S7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC011242.1-201ENST00000433596 1158 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 MRPS18BP2-201ENST00000434310 759 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC140059.1-201ENST00000489238 361 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC138965.3-201ENST00000623875 498 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 MIR513A2-201ENST00000385249 127 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC013404.1-201ENST00000413068 249 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AL158823.1-201ENST00000418441 478 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 OR4K11P-201ENST00000431829 904 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 RPS7P5-201ENST00000441482 581 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AL136164.4-201ENST00000625013 2135 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 Y_RNA.457-201ENST00000384237 111 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC244505.5-201ENST00000443639 207 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 NAMPTP2-201ENST00000505629 1115 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 RPL23AP31-201ENST00000456160 467 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC128657.1-201ENST00000549459 145 ntBASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR4Q5T4S7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 RPL21P109-201ENST00000422213 475 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 BNIP3P26-201ENST00000600827 554 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AC096644.4-201ENST00000563417 2912 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms