Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC027088.4-201ENST00000611559 1947 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC107081.3-201ENST00000612715 2034 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC112243.1-201ENST00000623949 3851 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 HSPA8P14-201ENST00000552265 1805 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 Z75746.1-201ENST00000440243 2080 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RNU6-1298P-201ENST00000362456 101 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RNA5SP375-201ENST00000362975 119 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RNU6-1303P-201ENST00000364841 107 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RN7SKP81-201ENST00000365603 331 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 Y_RNA.597-201ENST00000410463 100 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RN7SKP206-201ENST00000410823 293 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RNU6-1135P-201ENST00000411083 103 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RPL23AP36-201ENST00000413895 458 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 BX842559.1-201ENST00000419615 532 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RPS7P3-201ENST00000443360 580 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC091179.1-201ENST00000461606 579 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 RPL9P9-202ENST00000466501 579 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 ATP5LP5-201ENST00000483050 299 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC136932.1-201ENST00000574771 208 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 MIR4273-201ENST00000582824 84 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 ELOCP5-201ENST00000604924 333 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC008962.1-201ENST00000605729 304 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC007619.2-201ENST00000605743 379 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AL591516.1-201ENST00000611326 274 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 MIR6793-201ENST00000612376 63 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AP005431.1-201ENST00000618479 319 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC069234.4-201ENST00000621276 412 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC000123.2-201ENST00000623124 461 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 IRF5P1-201ENST00000504852 2164 ntBASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNFT1Q5M7Z0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC092724.1-201ENST00000624623 3397 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC090740.1-201ENST00000623193 2262 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RNU1-150P-201ENST00000362491 162 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 Y_RNA.27-201ENST00000362540 103 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-1329P-201ENST00000365664 107 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-1035P-201ENST00000384477 107 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RNA5SP284-201ENST00000384547 118 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC005522.1-201ENST00000395416 346 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AP003170.5-201ENST00000397185 335 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 PRRC2CP1-201ENST00000404428 159 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 MIR1203-201ENST00000408812 85 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms