Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CACNA1EQ15878 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.2□□□□□ -2.06
CACNA1EQ15878 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.2□□□□□ -2.06
CACNA1EQ15878 AC078899.5-201ENST00000612475 178 ntBASIC2.2□□□□□ -2.06
CACNA1EQ15878 AC004925.1-201ENST00000624256 2706 ntBASIC2.2□□□□□ -2.06
CACNA1EQ15878 AL359893.1-201ENST00000447628 1580 ntBASIC2.2□□□□□ -2.06
CACNA1EQ15878 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CACNA1EQ15878 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CACNA1EQ15878 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CACNA1EQ15878 RNA5SP456-201ENST00000364002 114 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 SNORA67.3-201ENST00000384366 140 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 MIR3074-201ENST00000384885 81 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1EQ15878 ATG3P1-201ENST00000419507 911 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AL034379.1-201ENST00000423216 253 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 MTCO1P42-201ENST00000457379 726 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 GNAI2P1-201ENST00000541815 315 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 MTCYBP28-201ENST00000566728 1132 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1EQ15878 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 AC090229.1-201ENST00000590983 1609 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1EQ15878 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1EQ15878 RWDD4P2-201ENST00000426392 563 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AC004866.2-201ENST00000438285 481 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 LINC00888-204ENST00000487386 421 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 RWDD4P1-201ENST00000488019 565 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AC010198.2-201ENST00000550612 259 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 AP003117.2-201ENST00000606010 545 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AC022960.2-201ENST00000616300 666 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 AC009831.4-201ENST00000620744 325 ntBASIC2.19□□□□□ -2.06
CACNA1EQ15878 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.19□□□□□ -2.06
CACNA1EQ15878 XPOTP1-201ENST00000443317 2398 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC008264.2-201ENST00000610193 3731 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.18□□□□□ -2.06
CACNA1EQ15878 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.18□□□□□ -2.06
CACNA1EQ15878 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.18□□□□□ -2.06
CACNA1EQ15878 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1EQ15878 BX664608.1-201ENST00000610519 487 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC245517.5-201ENST00000611529 162 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1EQ15878 ADAM3A-203ENST00000461344 2157 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 Y_RNA.540-201ENST00000384638 111 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.18□□□□□ -2.06
CACNA1EQ15878 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC103710.1-201ENST00000610003 901 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC002076.2-201ENST00000617362 122 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 AC011460.1-201ENST00000636268 1834 ntBASIC2.18□□□□□ -2.06
CACNA1EQ15878 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 MIR21-201ENST00000362134 72 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 MIR365B-201ENST00000362317 111 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 RNY1P10-201ENST00000363268 113 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CACNA1EQ15878 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 AC009969.1-201ENST00000438726 172 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 AP000893.1-201ENST00000474462 794 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 AC072039.1-201ENST00000477611 581 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 AC055855.1-201ENST00000489563 579 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 FAM92A1P2-202ENST00000504766 877 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 AL139286.1-201ENST00000604465 483 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 Z99496.1-201ENST00000469424 1477 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 FRG1BP-201ENST00000278882 761 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 Z82205.1-201ENST00000428456 297 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 GAPDHP27-201ENST00000447427 1020 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 RNU6-295P-201ENST00000516901 104 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 MTCYBP19-201ENST00000517463 1124 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CACNA1EQ15878 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CACNA1EQ15878 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.17□□□□□ -2.06
CACNA1EQ15878 AP006248.2-201ENST00000623309 592 ntBASIC2.17□□□□□ -2.06
CACNA1EQ15878 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 AC093909.5-201ENST00000621839 1799 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1EQ15878 MIR583-201ENST00000384846 75 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms