Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CACNA1SQ13698 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CACNA1SQ13698 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CACNA1SQ13698 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CACNA1SQ13698 RNU1-100P-201ENST00000365255 165 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 RNA5SP210-201ENST00000391034 120 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC023050.1-201ENST00000498198 304 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AP001317.1-201ENST00000531194 960 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC006270.2-201ENST00000578523 652 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC115989.2-201ENST00000578640 563 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.05□□□□□ -1.92
CACNA1SQ13698 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC007687.1-201ENST00000602704 304 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 XIST_intron.1-201ENST00000619444 68 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 MIR6873-201ENST00000622788 63 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC103798.2-201ENST00000624292 632 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC010733.2-201ENST00000589496 5702 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AF127577.6-201ENST00000623352 2191 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.05□□□□□ -1.92
CACNA1SQ13698 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CACNA1SQ13698 MAPK10-322ENST00000641485 4530 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CACNA1SQ13698 RNA5SP129-201ENST00000410276 118 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC244505.4-201ENST00000434905 287 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 SSXP5-201ENST00000443473 287 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.05□□□□□ -1.92
CACNA1SQ13698 AL049830.2-201ENST00000480072 201 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.05□□□□□ -1.92
CACNA1SQ13698 RN7SL283P-201ENST00000489055 303 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CACNA1SQ13698 NF1P10-201ENST00000613227 742 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 AC145207.9-201ENST00000623802 325 ntBASIC3.05□□□□□ -1.92
CACNA1SQ13698 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CACNA1SQ13698 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CACNA1SQ13698 SNORA31-201ENST00000362607 130 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CACNA1SQ13698 AL079342.1-201ENST00000401460 267 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 RPL31P52-201ENST00000407532 367 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 RNU2-6P-201ENST00000411404 190 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.04□□□□□ -1.92
CACNA1SQ13698 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.04□□□□□ -1.92
CACNA1SQ13698 HMGN1P8-201ENST00000463578 288 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 RPL30P9-201ENST00000465586 330 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 RPL21P99-201ENST00000480369 423 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 POU5F1P7-201ENST00000508759 541 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 MTCO1P30-201ENST00000515244 580 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 RN7SKP244-201ENST00000516513 307 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.04□□□□□ -1.92
CACNA1SQ13698 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CACNA1SQ13698 AC000367.1-201ENST00000452711 1766 ntBASIC3.04□□□□□ -1.92
CACNA1SQ13698 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CACNA1SQ13698 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CACNA1SQ13698 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CACNA1SQ13698 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.04□□□□□ -1.92
CACNA1SQ13698 RNU6-76P-201ENST00000384060 104 ntBASIC3.03□□□□□ -1.92
CACNA1SQ13698 AC009969.1-201ENST00000438726 172 ntBASIC3.03□□□□□ -1.92
CACNA1SQ13698 RN7SKP24-201ENST00000515888 284 ntBASIC3.03□□□□□ -1.92
CACNA1SQ13698 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1SQ13698 MTND5P21-201ENST00000531961 522 ntBASIC3.03□□□□□ -1.92
CACNA1SQ13698 AC044913.1-201ENST00000557200 430 ntBASIC3.03□□□□□ -1.92
CACNA1SQ13698 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1SQ13698 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1SQ13698 MIR1273D-201ENST00000577266 86 ntBASIC3.03□□□□□ -1.92
CACNA1SQ13698 FAM60CP-201ENST00000591086 664 ntBASIC3.03□□□□□ -1.92
CACNA1SQ13698 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.03□□□□□ -1.92
CACNA1SQ13698 DCAF13P3-201ENST00000561147 1334 ntBASIC3.03□□□□□ -1.92
CACNA1SQ13698 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CACNA1SQ13698 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CACNA1SQ13698 SNORD114-1-201ENST00000362705 72 ntBASIC3.03□□□□□ -1.93
CACNA1SQ13698 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CACNA1SQ13698 RPS20P25-201ENST00000412447 352 ntBASIC3.03□□□□□ -1.93
CACNA1SQ13698 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.03□□□□□ -1.93
CACNA1SQ13698 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.03□□□□□ -1.93
CACNA1SQ13698 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.03□□□□□ -1.93
CACNA1SQ13698 AC126182.1-201ENST00000478134 357 ntBASIC3.03□□□□□ -1.93
CACNA1SQ13698 RPL9P6-201ENST00000492764 598 ntBASIC3.03□□□□□ -1.93
CACNA1SQ13698 SNORA31.1-201ENST00000515993 133 ntBASIC3.03□□□□□ -1.93
CACNA1SQ13698 SNORA31.5-201ENST00000516190 133 ntBASIC3.03□□□□□ -1.93
CACNA1SQ13698 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.03□□□□□ -1.93
CACNA1SQ13698 RNA5SP108-201ENST00000605921 117 ntBASIC3.03□□□□□ -1.93
CACNA1SQ13698 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.03□□□□□ -1.93
CACNA1SQ13698 AC117490.2-201ENST00000610042 594 ntBASIC3.03□□□□□ -1.93
CACNA1SQ13698 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.03□□□□□ -1.93
CACNA1SQ13698 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
CACNA1SQ13698 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CACNA1SQ13698 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.02□□□□□ -1.93
CACNA1SQ13698 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CACNA1SQ13698 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CACNA1SQ13698 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CACNA1SQ13698 AL021368.2-201ENST00000606125 5352 ntBASIC3.02□□□□□ -1.93
CACNA1SQ13698 RNA5SP295-201ENST00000362655 121 ntBASIC3.02□□□□□ -1.93
CACNA1SQ13698 RNA5SP189-201ENST00000364920 115 ntBASIC3.02□□□□□ -1.93
CACNA1SQ13698 RNU6-532P-201ENST00000384318 107 ntBASIC3.02□□□□□ -1.93
CACNA1SQ13698 EIF5P1-201ENST00000400019 1231 ntBASIC3.02□□□□□ -1.93
CACNA1SQ13698 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.02□□□□□ -1.93
CACNA1SQ13698 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CACNA1SQ13698 AIMP1P1-201ENST00000418670 937 ntBASIC3.02□□□□□ -1.93
CACNA1SQ13698 CKS1BP7-201ENST00000522230 235 ntBASIC3.02□□□□□ -1.93
CACNA1SQ13698 IGHV3-76-201ENST00000522465 295 ntBASIC3.02□□□□□ -1.93
CACNA1SQ13698 OR4A45P-201ENST00000529954 901 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms