Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.48□□□□□ -1.85
SCN1BQ07699 PSMB7P1-201ENST00000556349 514 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AP005205.1-201ENST00000563503 508 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AC011451.2-201ENST00000604303 598 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 ARF4P1-201ENST00000605447 541 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AP002826.1-201ENST00000608835 315 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AC005962.2-201ENST00000611427 652 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 FAM27D1-201ENST00000612308 341 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AC002076.2-201ENST00000617362 122 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AC011944.2-201ENST00000624440 683 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.48□□□□□ -1.85
SCN1BQ07699 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SCN1BQ07699 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SCN1BQ07699 DDX43P2-201ENST00000604753 1354 ntBASIC3.48□□□□□ -1.85
SCN1BQ07699 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN1BQ07699 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN1BQ07699 RNU6-777P-201ENST00000364265 104 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 RNU6-83P-201ENST00000384568 112 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AL590704.1-201ENST00000402856 794 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 RNU6-757P-201ENST00000410334 100 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 SNORA57.3-201ENST00000411095 141 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC009237.5-201ENST00000414271 501 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN1BQ07699 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SCN1BQ07699 MTATP6P4-201ENST00000427725 675 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 SNRPEP7-201ENST00000438350 220 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC083863.1-201ENST00000438811 231 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 USP9YP10-201ENST00000454868 628 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC007967.1-201ENST00000455422 1159 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC007537.2-201ENST00000472093 511 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN1BQ07699 RPL7P23-201ENST00000493874 747 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AC020699.1-201ENST00000505161 445 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC026784.1-201ENST00000507986 352 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC093824.1-201ENST00000508796 343 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN1BQ07699 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AC103783.1-201ENST00000520506 373 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN1BQ07699 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCN1BQ07699 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AC055876.1-202ENST00000567053 138 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC025627.2-201ENST00000576220 160 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AL356218.2-201ENST00000605264 187 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC092106.3-201ENST00000611308 722 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC114781.5-201ENST00000615297 108 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AL450472.3-201ENST00000615578 367 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SCN1BQ07699 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN1BQ07699 AC079228.1-201ENST00000624774 1049 ntBASIC3.47□□□□□ -1.85
SCN1BQ07699 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN1BQ07699 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.47□□□□□ -1.85
SCN1BQ07699 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCN1BQ07699 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SCN1BQ07699 MTCO1P9-201ENST00000505577 1534 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN1BQ07699 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCN1BQ07699 AL161781.1-201ENST00000354277 403 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 RNU6-97P-201ENST00000363387 104 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 RNA5SP509-201ENST00000364577 119 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 RNU6-1207P-201ENST00000384343 107 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.46□□□□□ -1.86
SCN1BQ07699 Z97055.1-201ENST00000419730 712 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC006960.1-201ENST00000419980 153 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 OR4K11P-201ENST00000431829 904 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN1BQ07699 HIGD1AP11-201ENST00000438361 280 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 HMGB1P37-201ENST00000439613 609 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC006011.1-201ENST00000442758 349 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN1BQ07699 RPL30P9-201ENST00000465586 330 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN1BQ07699 RN7SL691P-201ENST00000494487 301 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC108475.1-201ENST00000507880 950 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC109464.2-201ENST00000510242 943 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC022483.1-201ENST00000514020 567 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 RN7SKP209-201ENST00000516888 304 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC008489.1-201ENST00000524271 483 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC006518.1-201ENST00000541449 943 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 CR383656.6-201ENST00000550518 394 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms