Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.47□□□□□ -1.53
SOX4Q06945 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 AC097063.1-201ENST00000426714 1797 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
SOX4Q06945 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
SOX4Q06945 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 AC011460.1-201ENST00000636268 1834 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 RNA5SP223-201ENST00000365174 120 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 Y_RNA.476-201ENST00000384347 108 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 RNU6-1222P-201ENST00000384615 107 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX4Q06945 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX4Q06945 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX4Q06945 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX4Q06945 CEACAMP9-201ENST00000442990 513 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 AL035666.1-201ENST00000446195 348 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX4Q06945 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX4Q06945 RNU7-180P-201ENST00000459240 63 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX4Q06945 AC018797.3-201ENST00000513388 1241 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX4Q06945 RNU6-976P-201ENST00000516086 111 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX4Q06945 IMMP1LP2-201ENST00000552954 492 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 SETP2-201ENST00000553886 926 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 MIR4700-201ENST00000578311 74 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX4Q06945 BNIP3P25-201ENST00000596023 559 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 AL512782.1-201ENST00000603093 364 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX4Q06945 AC000123.2-201ENST00000623124 461 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 CR392039.4-201ENST00000624968 501 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX4Q06945 CYP3A51P-201ENST00000633513 256 ntBASIC5.47□□□□□ -1.53
SOX4Q06945 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
SOX4Q06945 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX4Q06945 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SOX4Q06945 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX4Q06945 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SOX4Q06945 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX4Q06945 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX4Q06945 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
SOX4Q06945 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SOX4Q06945 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SOX4Q06945 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SOX4Q06945 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SOX4Q06945 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
SOX4Q06945 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SOX4Q06945 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX4Q06945 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SOX4Q06945 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SOX4Q06945 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX4Q06945 TAB3P1-202ENST00000452645 1634 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX4Q06945 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX4Q06945 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX4Q06945 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX4Q06945 Y_RNA.378-201ENST00000365652 113 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 SNORA2.3-201ENST00000383920 135 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 Y_RNA.557-201ENST00000384680 107 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 SNORA66-201ENST00000384792 133 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 MIR137-201ENST00000385223 102 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 U3.20-201ENST00000390909 217 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 MRPL42P3-201ENST00000401492 326 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AL024474.1-201ENST00000404655 591 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 RPS4XP9-201ENST00000405151 780 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 GPS2P1-201ENST00000411761 986 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX4Q06945 AL591212.2-201ENST00000433923 257 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AC108734.1-201ENST00000439549 399 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AL118520.1-201ENST00000450770 291 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX4Q06945 MTND1P9-201ENST00000453775 944 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AC104308.1-201ENST00000454621 333 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 RN7SL443P-201ENST00000464331 290 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 HMGB1P30-201ENST00000492455 606 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX4Q06945 AC116562.3-201ENST00000506136 177 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.46□□□□□ -1.54
SOX4Q06945 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX4Q06945 RNU6-764P-201ENST00000516396 105 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 HMGB1P19-201ENST00000517578 577 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AC068587.5-201ENST00000528506 175 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AC027369.5-201ENST00000533838 755 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX4Q06945 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX4Q06945 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX4Q06945 AC026470.2-201ENST00000561492 181 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 MIR3934-201ENST00000579806 107 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 MIR4480-201ENST00000582492 71 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX4Q06945 AF038458.1-201ENST00000588406 262 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms