Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC231657.1-201ENST00000624313 397 ntBASIC3.88□□□□□ -1.79
LTBQ06643 AL157786.1-207ENST00000627771 695 ntBASIC3.88□□□□□ -1.79
LTBQ06643 CDRT1-208ENST00000630868 794 ntBASIC3.88□□□□□ -1.79
LTBQ06643 AC008013.2-202ENST00000637965 364 ntBASIC3.88□□□□□ -1.79
LTBQ06643 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LTBQ06643 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LTBQ06643 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.88□□□□□ -1.79
LTBQ06643 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LTBQ06643 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LTBQ06643 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.88□□□□□ -1.79
LTBQ06643 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.88□□□□□ -1.79
LTBQ06643 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
LTBQ06643 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.88□□□□□ -1.79
LTBQ06643 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LTBQ06643 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 AC032011.1-201ENST00000611703 1549 ntBASIC3.87□□□□□ -1.79
LTBQ06643 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.87□□□□□ -1.79
LTBQ06643 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 AC019155.1-201ENST00000382242 574 ntBASIC3.87□□□□□ -1.79
LTBQ06643 RNU6-657P-201ENST00000383904 107 ntBASIC3.87□□□□□ -1.79
LTBQ06643 RNU5A-6P-201ENST00000384136 116 ntBASIC3.87□□□□□ -1.79
LTBQ06643 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 RPS27AP14-201ENST00000422868 454 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.87□□□□□ -1.79
LTBQ06643 AC009965.2-201ENST00000425328 970 ntBASIC3.87□□□□□ -1.79
LTBQ06643 USP9YP18-201ENST00000425912 695 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.87□□□□□ -1.79
LTBQ06643 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 RPS20P1-201ENST00000434853 354 ntBASIC3.87□□□□□ -1.79
LTBQ06643 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.87□□□□□ -1.79
LTBQ06643 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 PDSS1P2-201ENST00000449397 678 ntBASIC3.87□□□□□ -1.79
LTBQ06643 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.87□□□□□ -1.79
LTBQ06643 AC098824.1-201ENST00000453565 980 ntBASIC3.87□□□□□ -1.79
LTBQ06643 RPS15AP1-201ENST00000457423 391 ntBASIC3.87□□□□□ -1.79
LTBQ06643 RN7SL98P-201ENST00000462271 300 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC013828.1-201ENST00000481845 158 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC108941.1-201ENST00000502853 530 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC105252.1-201ENST00000503089 286 ntBASIC3.87□□□□□ -1.79
LTBQ06643 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.87□□□□□ -1.79
LTBQ06643 RNU6-314P-201ENST00000516574 104 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.87□□□□□ -1.79
LTBQ06643 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.87□□□□□ -1.79
LTBQ06643 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LTBQ06643 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.87□□□□□ -1.79
LTBQ06643 AC006064.5-201ENST00000541782 248 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.87□□□□□ -1.79
LTBQ06643 OR6C73P-201ENST00000546432 358 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC124947.2-202ENST00000552735 133 ntBASIC3.87□□□□□ -1.79
LTBQ06643 ZNF519P2-201ENST00000557032 169 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.87□□□□□ -1.79
LTBQ06643 AC141257.3-201ENST00000572906 215 ntBASIC3.87□□□□□ -1.79
LTBQ06643 MIR3913-1-201ENST00000577744 102 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.87□□□□□ -1.79
LTBQ06643 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 AC008687.2-201ENST00000597865 520 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AL359535.1-201ENST00000612100 1087 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC007014.2-201ENST00000615581 479 ntBASIC3.87□□□□□ -1.79
LTBQ06643 AC005609.4-201ENST00000625071 447 ntBASIC3.87□□□□□ -1.79
LTBQ06643 MIR3653-201ENST00000625572 110 ntBASIC3.87□□□□□ -1.79
LTBQ06643 CRYM-AS1-204ENST00000637983 556 ntBASIC3.87□□□□□ -1.79
LTBQ06643 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
LTBQ06643 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 AC006971.1-201ENST00000407916 4486 ntBASIC3.87□□□□□ -1.79
LTBQ06643 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LTBQ06643 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LTBQ06643 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
LTBQ06643 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LTBQ06643 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.87□□□□□ -1.79
LTBQ06643 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LTBQ06643 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LTBQ06643 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LTBQ06643 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LTBQ06643 ELF2P3-201ENST00000445099 1506 ntBASIC3.86□□□□□ -1.79
LTBQ06643 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.86□□□□□ -1.79
LTBQ06643 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LTBQ06643 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LTBQ06643 AC016716.1-201ENST00000265882 708 ntBASIC3.86□□□□□ -1.79
LTBQ06643 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
LTBQ06643 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.86□□□□□ -1.79
LTBQ06643 MIR506-201ENST00000384998 124 ntBASIC3.86□□□□□ -1.79
LTBQ06643 SNORD115-47-201ENST00000391226 86 ntBASIC3.86□□□□□ -1.79
LTBQ06643 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LTBQ06643 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.86□□□□□ -1.79
LTBQ06643 RN7SKP159-201ENST00000410657 292 ntBASIC3.86□□□□□ -1.79
LTBQ06643 AC234782.4-201ENST00000417646 1048 ntBASIC3.86□□□□□ -1.79
LTBQ06643 AL161631.1-201ENST00000417933 486 ntBASIC3.86□□□□□ -1.79
LTBQ06643 AIMP1P1-201ENST00000418670 937 ntBASIC3.86□□□□□ -1.79
LTBQ06643 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms