Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC5Q00444 DSTNP4-201ENST00000399472 474 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 AC109583.1-201ENST00000432156 268 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 AC140076.1-201ENST00000449897 361 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC5Q00444 HMGB1P22-201ENST00000505315 124 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC5Q00444 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC5Q00444 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC5Q00444 C1DP5-201ENST00000525775 383 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC5Q00444 SETP2-201ENST00000553886 926 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 ADAM3B-201ENST00000569937 840 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 MIR4325-201ENST00000583049 90 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
HOXC5Q00444 AC093010.3-201ENST00000570269 15214 ntBASIC2.51□□□□□ -2.01
HOXC5Q00444 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC5Q00444 AC109315.1-201ENST00000584143 1347 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AL359893.1-201ENST00000447628 1580 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 SNORA27.3-201ENST00000364937 134 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 SNORA44-201ENST00000384584 132 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HOXC5Q00444 MIR1250-201ENST00000408098 113 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC5Q00444 AL513175.1-201ENST00000431492 780 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 AC112220.1-201ENST00000434628 355 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 RPL23AP74-201ENST00000437246 471 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 ELOCP13-201ENST00000443934 329 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AC233982.1-201ENST00000451247 436 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 RPL21P104-201ENST00000464143 478 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AC010285.1-201ENST00000470580 392 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXC5Q00444 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC5Q00444 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXC5Q00444 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC5Q00444 HIGD1AP13-201ENST00000509878 289 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC5Q00444 AC108157.1-201ENST00000510511 539 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 TRAV11-201ENST00000539512 339 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 EIF5A2P1-201ENST00000564027 460 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC5Q00444 AC008687.2-201ENST00000597865 520 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AL356575.1-201ENST00000603008 283 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC5Q00444 AL590282.1-201ENST00000610379 1136 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC5Q00444 CR589904.2-201ENST00000612533 440 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AC004696.1-201ENST00000614345 607 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HOXC5Q00444 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC5Q00444 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXC5Q00444 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC5Q00444 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.5□□□□□ -2.01
HOXC5Q00444 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HOXC5Q00444 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HOXC5Q00444 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC5Q00444 RNU1-140P-201ENST00000365040 165 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 RNU6-40P-201ENST00000384254 107 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 RNU1-101P-201ENST00000391171 127 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HOXC5Q00444 RPL21P75-201ENST00000396599 483 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 RPL21P28-201ENST00000401418 483 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AL138827.1-201ENST00000402666 306 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AL592114.1-201ENST00000403842 483 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 RNU4-78P-201ENST00000410940 126 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AL096701.2-201ENST00000416920 238 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC5Q00444 MTCO1P57-201ENST00000432182 261 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AL135938.1-201ENST00000443141 297 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC5Q00444 HMGB1P15-201ENST00000453854 435 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 RPL21P39-201ENST00000463605 483 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AC011979.1-201ENST00000472300 483 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 RPL21P93-201ENST00000480465 489 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AC233702.1-201ENST00000482905 502 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AC087190.1-201ENST00000484462 480 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AC093591.1-201ENST00000491435 481 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXC5Q00444 RPL21P16-201ENST00000495531 483 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC5Q00444 SLC25A15P5-201ENST00000508033 253 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC5Q00444 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC5Q00444 MTCO2P32-201ENST00000514865 403 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 RNU6-56P-201ENST00000516986 93 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AC090136.1-201ENST00000520009 240 ntBASIC2.49□□□□□ -2.01
HOXC5Q00444 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXC5Q00444 AC079600.2-201ENST00000550076 130 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms