Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RAE1P78406 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RAE1P78406 RPS3AP36-201ENST00000398190 775 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.08□□□□□ -1.76
RAE1P78406 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RAE1P78406 AC127526.1-201ENST00000417526 366 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AL161631.1-201ENST00000417933 486 ntBASIC4.08□□□□□ -1.76
RAE1P78406 RBMY1KP-201ENST00000423480 476 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AL772161.1-201ENST00000439130 476 ntBASIC4.08□□□□□ -1.76
RAE1P78406 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.08□□□□□ -1.76
RAE1P78406 RPS20P24-201ENST00000457473 361 ntBASIC4.08□□□□□ -1.76
RAE1P78406 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 NIP7P2-201ENST00000485801 544 ntBASIC4.08□□□□□ -1.76
RAE1P78406 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 AC108078.1-201ENST00000508073 725 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 AC006499.6-201ENST00000511169 607 ntBASIC4.08□□□□□ -1.76
RAE1P78406 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.08□□□□□ -1.76
RAE1P78406 Y_RNA.672-201ENST00000516289 104 ntBASIC4.08□□□□□ -1.76
RAE1P78406 RNU6-1178P-201ENST00000516674 107 ntBASIC4.08□□□□□ -1.76
RAE1P78406 RNU2-46P-201ENST00000517038 113 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.08□□□□□ -1.76
RAE1P78406 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.08□□□□□ -1.76
RAE1P78406 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.08□□□□□ -1.76
RAE1P78406 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RAE1P78406 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.08□□□□□ -1.76
RAE1P78406 AC092125.1-201ENST00000562568 1995 ntBASIC4.08□□□□□ -1.76
RAE1P78406 HNRNPCP4-201ENST00000571636 900 ntBASIC4.08□□□□□ -1.76
RAE1P78406 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.08□□□□□ -1.76
RAE1P78406 DUXAP4-201ENST00000603046 613 ntBASIC4.08□□□□□ -1.76
RAE1P78406 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.08□□□□□ -1.76
RAE1P78406 MIR432-201ENST00000606207 94 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AL008729.2-201ENST00000606393 473 ntBASIC4.08□□□□□ -1.76
RAE1P78406 RNU6-87P-201ENST00000607561 108 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AC009159.1-201ENST00000618386 642 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AL445363.3-201ENST00000623080 671 ntBASIC4.08□□□□□ -1.76
RAE1P78406 BMS1P21-201ENST00000634565 365 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AC110994.2-201ENST00000635481 492 ntBASIC4.08□□□□□ -1.76
RAE1P78406 AC012618.3-205ENST00000637896 1496 ntBASIC4.08□□□□□ -1.76
RAE1P78406 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RAE1P78406 AC015813.6-201ENST00000624409 5808 ntBASIC4.08□□□□□ -1.76
RAE1P78406 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RAE1P78406 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.07□□□□□ -1.76
RAE1P78406 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RAE1P78406 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RAE1P78406 AC025031.4-201ENST00000621248 3271 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.07□□□□□ -1.76
RAE1P78406 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RAE1P78406 AC009951.1-201ENST00000623674 2614 ntBASIC4.07□□□□□ -1.76
RAE1P78406 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RAE1P78406 SNORA70E-201ENST00000384492 135 ntBASIC4.07□□□□□ -1.76
RAE1P78406 MIR181A1-201ENST00000385026 110 ntBASIC4.07□□□□□ -1.76
RAE1P78406 RPL17P50-201ENST00000396131 546 ntBASIC4.07□□□□□ -1.76
RAE1P78406 MIR1250-201ENST00000408098 113 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC078974.1-201ENST00000411597 223 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 AL157831.1-201ENST00000426134 473 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 RN7SL98P-201ENST00000462271 300 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AP000942.1-201ENST00000463969 747 ntBASIC4.07□□□□□ -1.76
RAE1P78406 RPS4XP10-201ENST00000465034 731 ntBASIC4.07□□□□□ -1.76
RAE1P78406 MTND1P3-201ENST00000484956 952 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.07□□□□□ -1.76
RAE1P78406 KCTD9P5-201ENST00000504141 1170 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.07□□□□□ -1.76
RAE1P78406 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 HMGB1P19-201ENST00000517578 577 ntBASIC4.07□□□□□ -1.76
RAE1P78406 IGKV2D-36-201ENST00000518643 226 ntBASIC4.07□□□□□ -1.76
RAE1P78406 IFITM8P-201ENST00000522529 394 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.07□□□□□ -1.76
RAE1P78406 AC069240.1-201ENST00000548774 375 ntBASIC4.07□□□□□ -1.76
RAE1P78406 CCNG2P1-201ENST00000549521 1000 ntBASIC4.07□□□□□ -1.76
RAE1P78406 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.07□□□□□ -1.76
RAE1P78406 AL391840.1-201ENST00000571144 367 ntBASIC4.07□□□□□ -1.76
RAE1P78406 MIR4715-201ENST00000584117 79 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AL355812.1-201ENST00000603215 216 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC004853.1-201ENST00000604902 698 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AP003117.2-201ENST00000606010 545 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC090948.1-201ENST00000607464 549 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC064801.1-201ENST00000612025 407 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC024941.1-201ENST00000612250 334 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.07□□□□□ -1.76
RAE1P78406 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RAE1P78406 AC140479.6-201ENST00000633535 357 ntBASIC4.07□□□□□ -1.76
RAE1P78406 AC010149.2-201ENST00000637608 315 ntBASIC4.07□□□□□ -1.76
RAE1P78406 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.07□□□□□ -1.76
RAE1P78406 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms