Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC126389.1-201ENST00000477436 290 ntBASIC2.31□□□□□ -2.04
UBA52P62987 NCOR1P1-202ENST00000486162 291 ntBASIC2.31□□□□□ -2.04
UBA52P62987 SRIP1-201ENST00000489235 288 ntBASIC2.31□□□□□ -2.04
UBA52P62987 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
UBA52P62987 HPRT1P3-201ENST00000539521 576 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AC079600.2-201ENST00000550076 130 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AL049874.4-201ENST00000557593 255 ntBASIC2.31□□□□□ -2.04
UBA52P62987 BDH2P1-201ENST00000602288 736 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AC113368.1-201ENST00000603736 382 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AC026790.2-201ENST00000606282 430 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AC091046.2-201ENST00000620775 665 ntBASIC2.31□□□□□ -2.04
UBA52P62987 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.31□□□□□ -2.04
UBA52P62987 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
UBA52P62987 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.31□□□□□ -2.04
UBA52P62987 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBA52P62987 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBA52P62987 MAPK10-266ENST00000641066 6555 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AC010733.2-201ENST00000589496 5702 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AL672167.1-206ENST00000356293 943 ntBASIC2.3□□□□□ -2.04
UBA52P62987 RNVU1-3-201ENST00000364313 161 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.3□□□□□ -2.04
UBA52P62987 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UBA52P62987 AC005517.2-201ENST00000424673 553 ntBASIC2.3□□□□□ -2.04
UBA52P62987 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.3□□□□□ -2.04
UBA52P62987 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.3□□□□□ -2.04
UBA52P62987 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.3□□□□□ -2.04
UBA52P62987 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.3□□□□□ -2.04
UBA52P62987 RPL17P49-201ENST00000443728 411 ntBASIC2.3□□□□□ -2.04
UBA52P62987 OR51B8P-201ENST00000449892 769 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AC233982.1-201ENST00000451247 436 ntBASIC2.3□□□□□ -2.04
UBA52P62987 NIPA2P5-201ENST00000452282 464 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AC069277.2-201ENST00000454211 432 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.3□□□□□ -2.04
UBA52P62987 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.3□□□□□ -2.04
UBA52P62987 RPL23AP55-201ENST00000498163 452 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AC034159.1-201ENST00000513885 583 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.3□□□□□ -2.04
UBA52P62987 SNORA31.11-201ENST00000516528 139 ntBASIC2.3□□□□□ -2.04
UBA52P62987 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.3□□□□□ -2.04
UBA52P62987 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.3□□□□□ -2.04
UBA52P62987 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.3□□□□□ -2.04
UBA52P62987 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.3□□□□□ -2.04
UBA52P62987 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.3□□□□□ -2.04
UBA52P62987 AC234775.3-201ENST00000564612 656 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.3□□□□□ -2.04
UBA52P62987 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.3□□□□□ -2.04
UBA52P62987 MIR4446-201ENST00000578505 67 ntBASIC2.3□□□□□ -2.04
UBA52P62987 RPL23AP78-201ENST00000599928 470 ntBASIC2.3□□□□□ -2.04
UBA52P62987 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UBA52P62987 AC104446.1-201ENST00000613728 1321 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AP002907.1-201ENST00000606361 1430 ntBASIC2.3□□□□□ -2.04
UBA52P62987 AC073055.1-201ENST00000456901 1621 ntBASIC2.3□□□□□ -2.04
UBA52P62987 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
UBA52P62987 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
UBA52P62987 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
UBA52P62987 AL136520.1-201ENST00000600311 1322 ntBASIC2.29□□□□□ -2.04
UBA52P62987 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBA52P62987 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.29□□□□□ -2.04
UBA52P62987 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.29□□□□□ -2.04
UBA52P62987 AC241520.1-201ENST00000422654 1099 ntBASIC2.29□□□□□ -2.04
UBA52P62987 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.29□□□□□ -2.04
UBA52P62987 AL513043.1-201ENST00000439124 535 ntBASIC2.29□□□□□ -2.04
UBA52P62987 UBBP3-201ENST00000445497 241 ntBASIC2.29□□□□□ -2.04
UBA52P62987 RPL37P4-201ENST00000448908 268 ntBASIC2.29□□□□□ -2.04
UBA52P62987 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.29□□□□□ -2.04
UBA52P62987 AC146507.1-201ENST00000468335 354 ntBASIC2.29□□□□□ -2.04
UBA52P62987 AP000852.1-201ENST00000472460 573 ntBASIC2.29□□□□□ -2.04
UBA52P62987 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.29□□□□□ -2.04
UBA52P62987 MTATP6P22-201ENST00000507369 598 ntBASIC2.29□□□□□ -2.04
UBA52P62987 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.29□□□□□ -2.04
UBA52P62987 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
UBA52P62987 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.29□□□□□ -2.04
UBA52P62987 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
UBA52P62987 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UBA52P62987 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
UBA52P62987 RNU6-859P-201ENST00000362728 107 ntBASIC2.28□□□□□ -2.04
UBA52P62987 RNU1-138P-201ENST00000384093 164 ntBASIC2.28□□□□□ -2.04
UBA52P62987 MIR142-201ENST00000384835 87 ntBASIC2.28□□□□□ -2.04
UBA52P62987 AL360182.1-201ENST00000397433 468 ntBASIC2.28□□□□□ -2.04
UBA52P62987 RN7SKP222-201ENST00000410651 315 ntBASIC2.28□□□□□ -2.04
UBA52P62987 RNU2-52P-201ENST00000410680 190 ntBASIC2.28□□□□□ -2.04
UBA52P62987 AL031736.2-201ENST00000426573 787 ntBASIC2.28□□□□□ -2.04
UBA52P62987 ARL5AP4-201ENST00000430731 512 ntBASIC2.28□□□□□ -2.04
UBA52P62987 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.28□□□□□ -2.04
UBA52P62987 Z96811.1-201ENST00000445880 108 ntBASIC2.28□□□□□ -2.04
UBA52P62987 OR7L1P-201ENST00000456181 380 ntBASIC2.28□□□□□ -2.04
UBA52P62987 NF1P3-201ENST00000457709 450 ntBASIC2.28□□□□□ -2.04
UBA52P62987 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.28□□□□□ -2.04
UBA52P62987 AC009097.3-201ENST00000563557 1018 ntBASIC2.28□□□□□ -2.04
UBA52P62987 AC007566.2-201ENST00000603642 413 ntBASIC2.28□□□□□ -2.04
UBA52P62987 AC073387.2-201ENST00000604797 784 ntBASIC2.28□□□□□ -2.04
UBA52P62987 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
UBA52P62987 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.28□□□□□ -2.04
UBA52P62987 FO624990.1-201ENST00000636373 85 ntBASIC2.28□□□□□ -2.04
UBA52P62987 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
UBA52P62987 AL049780.3-201ENST00000624612 1583 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC092593.1-201ENST00000515413 1815 ntBASIC2.27□□□□□ -2.05
UBA52P62987 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.27□□□□□ -2.05
UBA52P62987 SNORD56.5-201ENST00000364281 72 ntBASIC2.27□□□□□ -2.05
UBA52P62987 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms