Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCS2P54868 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGCS2P54868 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGCS2P54868 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS2P54868 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS2P54868 RPAP2P1-201ENST00000603626 1168 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 Z82195.1-201ENST00000604558 398 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AC009948.4-201ENST00000604692 675 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AC113194.1-201ENST00000606037 500 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 OR2AS2P-201ENST00000606902 342 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AC034229.4-201ENST00000607861 441 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 AL078595.3-201ENST00000623815 1166 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS2P54868 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGCS2P54868 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS2P54868 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.54□□□□□ -1.84
HMGCS2P54868 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCS2P54868 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HMGCS2P54868 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HMGCS2P54868 ZNF29P-201ENST00000225587 168 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCS2P54868 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HMGCS2P54868 AC110754.1-201ENST00000399740 601 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 BTF3P8-201ENST00000414577 526 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS2P54868 AL009174.1-201ENST00000426577 416 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 MTCYBP15-201ENST00000433123 1127 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 GTF2IP3-201ENST00000433887 494 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS2P54868 UBE2V1P5-201ENST00000440070 405 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 AC002542.1-201ENST00000440683 193 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 OR10R1P-201ENST00000441524 1141 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HMGCS2P54868 RPL29P29-201ENST00000448725 423 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS2P54868 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 BX248409.1-201ENST00000455497 255 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 DUXAP8-207ENST00000456786 622 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 KC877373.1-201ENST00000479066 408 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGCS2P54868 RPL5P23-201ENST00000496040 868 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS2P54868 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 RN7SKP132-201ENST00000516001 208 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 RNA5SP367-201ENST00000516557 118 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS2P54868 AC087276.1-201ENST00000529659 480 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS2P54868 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 AL157392.4-201ENST00000609756 345 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCS2P54868 DUXAP10-204ENST00000612052 616 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 AC018926.3-201ENST00000618841 406 ntBASIC3.53□□□□□ -1.84
HMGCS2P54868 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGCS2P54868 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCS2P54868 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS2P54868 USP8P1-201ENST00000494673 3183 ntBASIC3.53□□□□□ -1.85
HMGCS2P54868 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCS2P54868 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCS2P54868 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS2P54868 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS2P54868 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCS2P54868 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS2P54868 XPOTP1-201ENST00000443317 2398 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 NACA3P-201ENST00000359690 648 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCS2P54868 MIR525-201ENST00000384978 85 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 MTCO1P56-201ENST00000401674 224 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCS2P54868 RNU6-575P-201ENST00000411326 105 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 MTND4P3-201ENST00000417829 541 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCS2P54868 PSMA2P3-201ENST00000429685 675 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCS2P54868 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS2P54868 AC093156.1-201ENST00000440382 670 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AL592437.1-201ENST00000443781 492 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 HMGB1P48-201ENST00000446155 598 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AL031313.1-201ENST00000448435 256 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCS2P54868 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGCS2P54868 AC015724.1-201ENST00000478577 156 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 RN7SL429P-201ENST00000479090 223 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 RPS4XP13-201ENST00000483219 789 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 RN7SL489P-201ENST00000486185 223 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 RPS27P23-201ENST00000487608 251 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AC108729.1-201ENST00000487812 947 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 RN7SL327P-201ENST00000488659 223 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS2P54868 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HMGCS2P54868 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCS2P54868 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
HMGCS2P54868 RPL7L1P13-201ENST00000511702 739 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms