Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AP000859.1-201ENST00000525536 307 ntBASIC5.7□□□□□ -1.5
EPHA4P54764 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHA4P54764 MIR4260-201ENST00000583107 67 ntBASIC5.7□□□□□ -1.5
EPHA4P54764 Z98751.3-201ENST00000604447 521 ntBASIC5.7□□□□□ -1.5
EPHA4P54764 RNA5SP440-201ENST00000612665 119 ntBASIC5.7□□□□□ -1.5
EPHA4P54764 MIR6729-201ENST00000618194 65 ntBASIC5.7□□□□□ -1.5
EPHA4P54764 AC138627.2-201ENST00000624202 601 ntBASIC5.7□□□□□ -1.5
EPHA4P54764 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
EPHA4P54764 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
EPHA4P54764 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHA4P54764 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHA4P54764 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EPHA4P54764 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 PHKBP1-201ENST00000450951 1951 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHA4P54764 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
EPHA4P54764 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
EPHA4P54764 U3.25-201ENST00000391209 220 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AC096664.2-201ENST00000411843 406 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 RPS23P10-201ENST00000416185 486 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 UBE2V1P4-201ENST00000425374 344 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHA4P54764 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHA4P54764 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHA4P54764 NEFMP1-201ENST00000443423 1006 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AC112492.4-201ENST00000456549 352 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 RPL37P6-201ENST00000460682 294 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 RN7SL717P-201ENST00000478343 297 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 RPL31P60-201ENST00000478450 367 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AC090686.1-201ENST00000481577 749 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AC114801.2-201ENST00000503825 781 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 SLC25A15P5-201ENST00000508033 253 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.69□□□□□ -1.5
EPHA4P54764 Y_RNA.689-201ENST00000516589 107 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AC012400.1-201ENST00000518452 381 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHA4P54764 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHA4P54764 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHA4P54764 TXNP4-201ENST00000575018 310 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AC016727.2-201ENST00000603988 621 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AC104763.2-201ENST00000604179 382 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AL034351.1-201ENST00000605288 668 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHA4P54764 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHA4P54764 uc_338.26-201ENST00000612659 160 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 EIF3FP1-201ENST00000613970 806 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 MIR6130-201ENST00000619419 109 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 MIR8062-201ENST00000621515 85 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
EPHA4P54764 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
EPHA4P54764 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
EPHA4P54764 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
EPHA4P54764 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
EPHA4P54764 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
EPHA4P54764 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
EPHA4P54764 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
EPHA4P54764 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
EPHA4P54764 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 AC140134.1-201ENST00000511830 3544 ntBASIC5.69□□□□□ -1.5
EPHA4P54764 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHA4P54764 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
EPHA4P54764 AC093671.1-201ENST00000624981 2929 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA4P54764 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
EPHA4P54764 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA4P54764 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA4P54764 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
EPHA4P54764 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA4P54764 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA4P54764 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA4P54764 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA4P54764 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
EPHA4P54764 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
EPHA4P54764 Y_RNA.210-201ENST00000364161 110 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 RN7SKP186-201ENST00000365371 303 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHA4P54764 GNG5P2-201ENST00000372054 207 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 Y_RNA.447-201ENST00000384184 113 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.68□□□□□ -1.5
EPHA4P54764 AC015977.1-201ENST00000418887 292 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.68□□□□□ -1.5
EPHA4P54764 AL391219.1-201ENST00000422570 483 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.68□□□□□ -1.5
EPHA4P54764 CYCSP43-201ENST00000438233 310 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 SUMO1P3-201ENST00000439961 304 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 AL663074.2-201ENST00000440621 479 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 RPL23AP33-201ENST00000442301 452 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 RPL36AP39-201ENST00000445859 318 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.68□□□□□ -1.5
EPHA4P54764 AC023141.9-201ENST00000458734 412 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 ACA64.4-201ENST00000459070 127 ntBASIC5.68□□□□□ -1.5
EPHA4P54764 AC087884.1-201ENST00000469738 328 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms