Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
CLTCL1P53675 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLTCL1P53675 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLTCL1P53675 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.19□□□□□ -1.9
CLTCL1P53675 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLTCL1P53675 DEFA7P-201ENST00000382676 285 ntBASIC3.19□□□□□ -1.9
CLTCL1P53675 RPL7P53-201ENST00000421245 739 ntBASIC3.19□□□□□ -1.9
CLTCL1P53675 AL031736.2-201ENST00000426573 787 ntBASIC3.19□□□□□ -1.9
CLTCL1P53675 CFTRP1-201ENST00000456646 183 ntBASIC3.19□□□□□ -1.9
CLTCL1P53675 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.19□□□□□ -1.9
CLTCL1P53675 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.19□□□□□ -1.9
CLTCL1P53675 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.19□□□□□ -1.9
CLTCL1P53675 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.19□□□□□ -1.9
CLTCL1P53675 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.19□□□□□ -1.9
CLTCL1P53675 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.19□□□□□ -1.9
CLTCL1P53675 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.19□□□□□ -1.9
CLTCL1P53675 AC103710.1-201ENST00000610003 901 ntBASIC3.19□□□□□ -1.9
CLTCL1P53675 MIR6845-201ENST00000613182 61 ntBASIC3.19□□□□□ -1.9
CLTCL1P53675 AC010378.1-201ENST00000619270 362 ntBASIC3.19□□□□□ -1.9
CLTCL1P53675 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLTCL1P53675 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.18□□□□□ -1.9
CLTCL1P53675 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.18□□□□□ -1.9
CLTCL1P53675 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLTCL1P53675 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
CLTCL1P53675 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.18□□□□□ -1.9
CLTCL1P53675 AL354719.1-201ENST00000406535 843 ntBASIC3.18□□□□□ -1.9
CLTCL1P53675 RANP7-201ENST00000418085 644 ntBASIC3.18□□□□□ -1.9
CLTCL1P53675 ATG10-AS1-201ENST00000504846 648 ntBASIC3.18□□□□□ -1.9
CLTCL1P53675 AL160237.3-201ENST00000604114 1013 ntBASIC3.18□□□□□ -1.9
CLTCL1P53675 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.18□□□□□ -1.9
CLTCL1P53675 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.18□□□□□ -1.9
CLTCL1P53675 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CLTCL1P53675 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLTCL1P53675 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.17□□□□□ -1.9
CLTCL1P53675 MIR6073-201ENST00000352083 89 ntBASIC3.17□□□□□ -1.9
CLTCL1P53675 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.17□□□□□ -1.9
CLTCL1P53675 AC004263.1-201ENST00000479327 332 ntBASIC3.17□□□□□ -1.9
CLTCL1P53675 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.17□□□□□ -1.9
CLTCL1P53675 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.17□□□□□ -1.9
CLTCL1P53675 AC107222.1-201ENST00000510899 637 ntBASIC3.17□□□□□ -1.9
CLTCL1P53675 AC026412.2-201ENST00000512270 1075 ntBASIC3.17□□□□□ -1.9
CLTCL1P53675 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.17□□□□□ -1.9
CLTCL1P53675 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLTCL1P53675 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.17□□□□□ -1.9
CLTCL1P53675 AC044913.1-201ENST00000557200 430 ntBASIC3.17□□□□□ -1.9
CLTCL1P53675 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.17□□□□□ -1.9
CLTCL1P53675 AL356266.1-201ENST00000623311 483 ntBASIC3.17□□□□□ -1.9
CLTCL1P53675 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CLTCL1P53675 AC117529.2-201ENST00000512159 2068 ntBASIC3.17□□□□□ -1.9
CLTCL1P53675 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.17□□□□□ -1.9
CLTCL1P53675 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLTCL1P53675 RNA5SP88-201ENST00000365560 109 ntBASIC3.16□□□□□ -1.9
CLTCL1P53675 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.16□□□□□ -1.9
CLTCL1P53675 AL138787.1-202ENST00000437804 898 ntBASIC3.16□□□□□ -1.9
CLTCL1P53675 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.16□□□□□ -1.9
CLTCL1P53675 HMGN2P23-201ENST00000456759 269 ntBASIC3.16□□□□□ -1.9
CLTCL1P53675 RNA5SP200-201ENST00000516360 103 ntBASIC3.16□□□□□ -1.9
CLTCL1P53675 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.16□□□□□ -1.9
CLTCL1P53675 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.16□□□□□ -1.9
CLTCL1P53675 AC010297.1-201ENST00000623948 149 ntBASIC3.16□□□□□ -1.9
CLTCL1P53675 CYP3A51P-201ENST00000633513 256 ntBASIC3.16□□□□□ -1.9
CLTCL1P53675 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.16□□□□□ -1.9
CLTCL1P53675 AC002543.1-201ENST00000299783 1954 ntBASIC3.16□□□□□ -1.9
CLTCL1P53675 RNU1-51P-201ENST00000365345 176 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 DHFRP5-201ENST00000406944 564 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLTCL1P53675 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.15□□□□□ -1.9
CLTCL1P53675 AC091179.1-201ENST00000461606 579 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.15□□□□□ -1.9
CLTCL1P53675 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.15□□□□□ -1.9
CLTCL1P53675 OR5D17P-201ENST00000531492 978 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 MIR3670-2-201ENST00000582974 65 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 MIR3670-1-201ENST00000584160 65 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 MIR3670-3-201ENST00000584855 65 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 MIR3670-4-201ENST00000612260 65 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 MIR7111-201ENST00000619751 72 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 AC093591.3-201ENST00000634516 308 ntBASIC3.15□□□□□ -1.9
CLTCL1P53675 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
CLTCL1P53675 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLTCL1P53675 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
CLTCL1P53675 Y_RNA.4-201ENST00000362333 112 ntBASIC3.15□□□□□ -1.91
CLTCL1P53675 RNA5SP99-201ENST00000364020 114 ntBASIC3.15□□□□□ -1.91
CLTCL1P53675 Y_RNA.238-201ENST00000364441 102 ntBASIC3.15□□□□□ -1.91
CLTCL1P53675 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.15□□□□□ -1.91
CLTCL1P53675 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLTCL1P53675 RNA5SP239-201ENST00000410218 129 ntBASIC3.15□□□□□ -1.91
CLTCL1P53675 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.15□□□□□ -1.91
CLTCL1P53675 TRBV1-201ENST00000476502 284 ntBASIC3.15□□□□□ -1.91
CLTCL1P53675 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.15□□□□□ -1.91
CLTCL1P53675 RNU6-826P-201ENST00000516827 104 ntBASIC3.15□□□□□ -1.91
CLTCL1P53675 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.15□□□□□ -1.91
CLTCL1P53675 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.15□□□□□ -1.91
CLTCL1P53675 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CLTCL1P53675 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.15□□□□□ -1.91
CLTCL1P53675 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.91
CLTCL1P53675 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CLTCL1P53675 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLTCL1P53675 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
CLTCL1P53675 RNU1-138P-201ENST00000384093 164 ntBASIC3.14□□□□□ -1.91
CLTCL1P53675 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms