Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.46□□□□□ -1.7
COPAP53621 AC022447.3-201ENST00000506865 495 ntBASIC4.46□□□□□ -1.7
COPAP53621 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.46□□□□□ -1.7
COPAP53621 AC006499.6-201ENST00000511169 607 ntBASIC4.46□□□□□ -1.7
COPAP53621 AF131216.2-201ENST00000512316 564 ntBASIC4.46□□□□□ -1.7
COPAP53621 AC026402.1-201ENST00000513642 170 ntBASIC4.46□□□□□ -1.7
COPAP53621 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.46□□□□□ -1.7
COPAP53621 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.46□□□□□ -1.7
COPAP53621 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
COPAP53621 AC091489.2-201ENST00000566263 604 ntBASIC4.46□□□□□ -1.7
COPAP53621 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.46□□□□□ -1.7
COPAP53621 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.46□□□□□ -1.7
COPAP53621 AC008638.3-201ENST00000603341 463 ntBASIC4.46□□□□□ -1.7
COPAP53621 AP000403.1-201ENST00000603349 851 ntBASIC4.46□□□□□ -1.7
COPAP53621 AC080078.2-201ENST00000603766 501 ntBASIC4.46□□□□□ -1.7
COPAP53621 AC079587.1-201ENST00000603846 277 ntBASIC4.46□□□□□ -1.7
COPAP53621 AL390208.1-201ENST00000605885 644 ntBASIC4.46□□□□□ -1.7
COPAP53621 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.46□□□□□ -1.7
COPAP53621 AC023043.4-201ENST00000612081 449 ntBASIC4.46□□□□□ -1.7
COPAP53621 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.46□□□□□ -1.7
COPAP53621 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.46□□□□□ -1.7
COPAP53621 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.46□□□□□ -1.7
COPAP53621 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.46□□□□□ -1.7
COPAP53621 AC139769.1-204ENST00000472297 1931 ntBASIC4.46□□□□□ -1.7
COPAP53621 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COPAP53621 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COPAP53621 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COPAP53621 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
COPAP53621 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
COPAP53621 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.45□□□□□ -1.7
COPAP53621 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COPAP53621 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 MFSD8-242ENST00000641690 4199 ntBASIC4.45□□□□□ -1.7
COPAP53621 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.45□□□□□ -1.7
COPAP53621 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
COPAP53621 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.45□□□□□ -1.7
COPAP53621 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
COPAP53621 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
COPAP53621 RHOT1P2-201ENST00000366423 333 ntBASIC4.45□□□□□ -1.7
COPAP53621 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 RNU2-16P-201ENST00000410712 136 ntBASIC4.45□□□□□ -1.7
COPAP53621 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.45□□□□□ -1.7
COPAP53621 RPL17P36-201ENST00000420302 549 ntBASIC4.45□□□□□ -1.7
COPAP53621 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.45□□□□□ -1.7
COPAP53621 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.45□□□□□ -1.7
COPAP53621 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.45□□□□□ -1.7
COPAP53621 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.45□□□□□ -1.7
COPAP53621 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.45□□□□□ -1.7
COPAP53621 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.45□□□□□ -1.7
COPAP53621 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.45□□□□□ -1.7
COPAP53621 RPL23AP52-201ENST00000439311 478 ntBASIC4.45□□□□□ -1.7
COPAP53621 HMGN2P21-201ENST00000447764 270 ntBASIC4.45□□□□□ -1.7
COPAP53621 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.45□□□□□ -1.7
COPAP53621 HMGB1P36-201ENST00000487709 576 ntBASIC4.45□□□□□ -1.7
COPAP53621 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.45□□□□□ -1.7
COPAP53621 AC108475.1-201ENST00000507880 950 ntBASIC4.45□□□□□ -1.7
COPAP53621 PARP4P3-201ENST00000510265 317 ntBASIC4.45□□□□□ -1.7
COPAP53621 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.45□□□□□ -1.7
COPAP53621 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.45□□□□□ -1.7
COPAP53621 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 IFITM8P-201ENST00000522529 394 ntBASIC4.45□□□□□ -1.7
COPAP53621 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.45□□□□□ -1.7
COPAP53621 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.45□□□□□ -1.7
COPAP53621 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.45□□□□□ -1.7
COPAP53621 CYP4A43P-201ENST00000568156 121 ntBASIC4.45□□□□□ -1.7
COPAP53621 MIR548AB-201ENST00000584917 84 ntBASIC4.45□□□□□ -1.7
COPAP53621 DEFB131E-202ENST00000602581 683 ntBASIC4.45□□□□□ -1.7
COPAP53621 AP002360.3-201ENST00000607673 710 ntBASIC4.45□□□□□ -1.7
COPAP53621 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.45□□□□□ -1.7
COPAP53621 AC009509.4-201ENST00000619202 509 ntBASIC4.45□□□□□ -1.7
COPAP53621 AC140479.6-201ENST00000633535 357 ntBASIC4.45□□□□□ -1.7
COPAP53621 AC093591.3-201ENST00000634516 308 ntBASIC4.45□□□□□ -1.7
COPAP53621 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
COPAP53621 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
COPAP53621 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 AC106871.1-201ENST00000568324 3102 ntBASIC4.45□□□□□ -1.7
COPAP53621 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPAP53621 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.44□□□□□ -1.7
COPAP53621 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 AL158163.1-201ENST00000603915 1649 ntBASIC4.44□□□□□ -1.7
COPAP53621 Y_RNA.97-201ENST00000363094 102 ntBASIC4.44□□□□□ -1.7
COPAP53621 RNU6-343P-201ENST00000364709 104 ntBASIC4.44□□□□□ -1.7
COPAP53621 Y_RNA.359-201ENST00000365498 102 ntBASIC4.44□□□□□ -1.7
COPAP53621 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.44□□□□□ -1.7
COPAP53621 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
COPAP53621 RNU6-339P-201ENST00000384310 107 ntBASIC4.44□□□□□ -1.7
COPAP53621 RNU6-1119P-201ENST00000384349 108 ntBASIC4.44□□□□□ -1.7
COPAP53621 RPS26P8-201ENST00000393490 348 ntBASIC4.44□□□□□ -1.7
COPAP53621 DEFB108C-201ENST00000400154 252 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms